| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0037 |
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| Symbol | |
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| ID | 5134257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 41998 |
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| End bp | 42657 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530360 |
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| Product | haloacid dehalogenase/epoxide hydrolase family protein |
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| Protein accession | YP_001214878 |
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| Protein GI | 147672516 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGGAACGA TGAACTTTCA AGCCGCTATT TTTGATATGG ATGGTCTACT ACTCGATACC
GAACGGGTCT GTATGCGAGT GTTTCAAGAA GCGTGTACCG CTTGTGGATT GCCTTTTCGG
CAAGAGGTCT ATCTCTCGGT GATTGGCTGT AATGCCAAAA CCATTAATGG CATTTTGAGC
CAAGCTTACG GTGAAGATTT GCCAAGGTTA CATAACGAGT GGCGGCAGCG TTATAACGCA
GTGGTCATGC ATGAAGCCAT ACCACATAAA GATGGGGTGA TCGCACTTCT TGAGTGGCTG
AAAGCCCGTT CAATCCCAGT AGCTGTCGCG ACCTCTACCC AAAAAGAAGT GGCACTTATC
AAGTTGCAGT TGGCTGGTTT AGATCACTAT TTTGCGAACA TCACCACGGG CTGTGAAGTG
ACTCAGGGTA AACCTCATCC AGAGATCTAT TTACTCGCGG CAGAGCGCTT AGGTGTCGAA
CCTCAGCAGT GCCTTGCGTT TGAAGACTCG AATAATGGCA TCAAAGCCGC TATGGCAGCG
CAAATGCACG CTTTCCAGAT CCCTGATTTA GTCAAACCGA GCCCCGAGGT GATCGCTCTT
GGTCATCCTA TTTGCACTAG CCTAAATGAA GTCATTGATC TGCTATCCCC CAATCACTAG
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| Protein sequence | MGTMNFQAAI FDMDGLLLDT ERVCMRVFQE ACTACGLPFR QEVYLSVIGC NAKTINGILS
QAYGEDLPRL HNEWRQRYNA VVMHEAIPHK DGVIALLEWL KARSIPVAVA TSTQKEVALI
KLQLAGLDHY FANITTGCEV TQGKPHPEIY LLAAERLGVE PQQCLAFEDS NNGIKAAMAA
QMHAFQIPDL VKPSPEVIAL GHPICTSLNE VIDLLSPNH
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