More than 300 homologs were found in PanDaTox collection
for query gene Dshi_1676 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009952  Dshi_1676  HAD-like hydrolase  100 
 
 
219 aa  431  1e-120  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.653252  normal  0.340852 
 
 
-
 
NC_011729  PCC7424_4434  HAD-superfamily hydrolase, subfamily IA, variant 3  45.83 
 
 
217 aa  184  1.0000000000000001e-45  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_4630  HAD family hydrolase  44.44 
 
 
225 aa  182  3e-45  Anabaena variabilis ATCC 29413  Bacteria  normal  hitchhiker  0.00554039 
 
 
-
 
NC_010322  PputGB1_2742  HAD family hydrolase  49.76 
 
 
218 aa  180  2e-44  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0251  HAD-superfamily hydrolase subfamily IA, variant 3  46.26 
 
 
216 aa  176  2e-43  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.822561 
 
 
-
 
NC_014212  Mesil_0482  HAD-superfamily hydrolase, subfamily IA, variant 3  48.37 
 
 
213 aa  176  3e-43  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2424  HAD family hydrolase  47.3 
 
 
221 aa  175  6e-43  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4442  HAD superfamily hydrolase  41.86 
 
 
228 aa  173  9.999999999999999e-43  'Nostoc azollae' 0708  Bacteria  normal  0.536318  n/a   
 
 
-
 
NC_008148  Rxyl_2101  HAD family hydrolase  50.48 
 
 
231 aa  169  2e-41  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2602  HAD family hydrolase  47.47 
 
 
227 aa  169  3e-41  Pseudomonas putida F1  Bacteria  normal  normal  0.852152 
 
 
-
 
NC_008312  Tery_2465  HAD family hydrolase  40.37 
 
 
220 aa  166  2e-40  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0272  HAD-superfamily hydrolase  45.97 
 
 
221 aa  164  1.0000000000000001e-39  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2948  HAD-superfamily hydrolase  46.05 
 
 
221 aa  162  3e-39  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3590  HAD-superfamily hydrolase  44.86 
 
 
218 aa  162  4.0000000000000004e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.906124  n/a   
 
 
-
 
NC_009485  BBta_7216  putative haloacid dehalogenase-like hydrolase  48.11 
 
 
223 aa  157  1e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1761  HAD family hydrolase  47.03 
 
 
230 aa  156  3e-37  Burkholderia xenovorans LB400  Bacteria  normal  0.0120798  normal  0.0416472 
 
 
-
 
NC_008312  Tery_0409  HAD family hydrolase  39.05 
 
 
228 aa  152  5e-36  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3475  HAD-superfamily hydrolase, subfamily IA, variant 3  41.86 
 
 
221 aa  147  1.0000000000000001e-34  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0320  HAD family hydrolase  41.31 
 
 
241 aa  140  1.9999999999999998e-32  Caulobacter sp. K31  Bacteria  normal  0.288784  normal 
 
 
-
 
NC_009355  OSTLU_40332  predicted protein  43.78 
 
 
247 aa  133  3e-30  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  n/a   
 
 
-
 
NC_013730  Slin_0136  HAD-superfamily hydrolase, subfamily IA, variant 3  30.39 
 
 
225 aa  111  9e-24  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3112  hypothetical protein  46.27 
 
 
142 aa  108  5e-23  Pseudomonas putida KT2440  Bacteria  normal  0.472591  normal  0.561703 
 
 
-
 
NC_011884  Cyan7425_3373  HAD-superfamily hydrolase, subfamily IA, variant 3  33.18 
 
 
231 aa  108  5e-23  Cyanothece sp. PCC 7425  Bacteria  normal  0.154909  normal  0.78527 
 
 
-
 
NC_013037  Dfer_2943  HAD-superfamily hydrolase, subfamily IA, variant 3  29.73 
 
 
218 aa  107  1e-22  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.86932  normal 
 
 
-
 
NC_007908  Rfer_2702  HAD family hydrolase  32.09 
 
 
232 aa  107  2e-22  Rhodoferax ferrireducens T118  Bacteria  normal  0.653691  n/a   
 
 
-
 
NC_013730  Slin_0267  HAD-superfamily hydrolase, subfamily IA, variant 3  31.46 
 
 
220 aa  107  2e-22  Spirosoma linguale DSM 74  Bacteria  normal  0.583067  normal  0.103324 
 
 
-
 
NC_013061  Phep_3134  HAD-superfamily hydrolase, subfamily IA, variant 3  28.57 
 
 
219 aa  105  5e-22  Pedobacter heparinus DSM 2366  Bacteria  normal  0.833655  normal 
 
 
-
 
NC_013730  Slin_0811  HAD-superfamily hydrolase, subfamily IA, variant 3  31.28 
 
 
225 aa  104  1e-21  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.332678 
 
 
-
 
NC_010524  Lcho_1765  HAD family hydrolase  33.48 
 
 
236 aa  102  5e-21  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0140115 
 
 
-
 
NC_012791  Vapar_3792  HAD-superfamily hydrolase, subfamily IA, variant 3  30.23 
 
 
229 aa  99.4  3e-20  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1839  HAD superfamily hydrolase  33.94 
 
 
228 aa  98.6  7e-20  Geobacter sulfurreducens PCA  Bacteria  normal  0.605398  n/a   
 
 
-
 
NC_009441  Fjoh_1356  HAD family hydrolase  26.49 
 
 
221 aa  98.2  8e-20  Flavobacterium johnsoniae UW101  Bacteria  normal  0.14421  n/a   
 
 
-
 
NC_011899  Hore_10160  HAD-superfamily hydrolase, subfamily IA, variant 3  27.66 
 
 
217 aa  95.9  4e-19  Halothermothrix orenii H 168  Bacteria  normal  0.64096  n/a   
 
 
-
 
NC_012918  GM21_1179  HAD-superfamily hydrolase, subfamily IA, variant 3  32.58 
 
 
224 aa  95.9  4e-19  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.0108500000000004e-18 
 
 
-
 
NC_008009  Acid345_3929  HAD family hydrolase  35.1 
 
 
224 aa  95.5  5e-19  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.436954  normal  0.193081 
 
 
-
 
NC_011059  Paes_2237  beta-phosphoglucomutase family hydrolase  30 
 
 
254 aa  95.1  7e-19  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.202357  normal 
 
 
-
 
NC_008025  Dgeo_1893  HAD family hydrolase  35.12 
 
 
222 aa  95.1  7e-19  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.675301 
 
 
-
 
NC_010831  Cphamn1_2486  beta-phosphoglucomutase family hydrolase  30.58 
 
 
232 aa  92.4  4e-18  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.24904  normal 
 
 
-
 
NC_008639  Cpha266_2701  beta-phosphoglucomutase family hydrolase  31.02 
 
 
232 aa  92.8  4e-18  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3082  HAD-superfamily hydrolase, subfamily IA, variant 3  33.03 
 
 
224 aa  92  6e-18  Geobacter bemidjiensis Bem  Bacteria  normal  0.48861  n/a   
 
 
-
 
NC_002936  DET0395  glycoprotease family protein/hydrolase, beta-phosphoglucomutase family  31.12 
 
 
456 aa  91.7  9e-18  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0374  HAD family hydrolase  30.48 
 
 
456 aa  91.3  1e-17  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000852801  n/a   
 
 
-
 
NC_013552  DhcVS_338  hypothetical protein  31.63 
 
 
456 aa  90.9  1e-17  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00693249  n/a   
 
 
-
 
NC_013235  Namu_2787  HAD-superfamily hydrolase, subfamily IA, variant 3  37.17 
 
 
230 aa  90.5  2e-17  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00137861  hitchhiker  0.0000132599 
 
 
-
 
NC_007406  Nwi_0649  HAD family hydrolase  37.63 
 
 
220 aa  89.7  3e-17  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_1348  HAD family hydrolase  31.5 
 
 
226 aa  89.7  3e-17  Geobacter metallireducens GS-15  Bacteria  normal  0.523514  hitchhiker  0.0000000193697 
 
 
-
 
NC_010483  TRQ2_1566  HAD family hydrolase  32.52 
 
 
216 aa  89  5e-17  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1871  HAD-superfamily hydrolase, subfamily IA, variant 3  32.83 
 
 
227 aa  88.6  8e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0853  HAD family hydrolase  34.47 
 
 
221 aa  88.6  8e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0114666 
 
 
-
 
NC_009486  Tpet_1517  HAD family hydrolase  32.52 
 
 
216 aa  88.2  9e-17  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1198  haloacid dehalogenase-like hydrolase  37.97 
 
 
220 aa  87.4  2e-16  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0647  HAD family hydrolase  33.01 
 
 
221 aa  86.7  2e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.496334  normal 
 
 
-
 
NC_009483  Gura_2233  HAD family hydrolase  32.37 
 
 
225 aa  86.3  3e-16  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3315  HAD family hydrolase  30.65 
 
 
242 aa  85.1  8e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.354727 
 
 
-
 
NC_010172  Mext_3991  HAD family hydrolase  33.49 
 
 
223 aa  84.7  9e-16  Methylobacterium extorquens PA1  Bacteria  normal  0.0589691  normal  0.286342 
 
 
-
 
NC_012034  Athe_0397  beta-phosphoglucomutase family hydrolase  28.26 
 
 
223 aa  84.3  0.000000000000001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1729  HAD family hydrolase  32.08 
 
 
728 aa  84.7  0.000000000000001  Methylobacillus flagellatus KT  Bacteria  normal  0.696153  hitchhiker  0.000289006 
 
 
-
 
NC_009523  RoseRS_0332  HAD family hydrolase  34.63 
 
 
232 aa  83.6  0.000000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.827004  normal  0.0405623 
 
 
-
 
NC_007512  Plut_2091  Beta-phosphoglucomutase hydrolase  28.88 
 
 
233 aa  84  0.000000000000002  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2469  HAD-superfamily hydrolase, subfamily IA, variant 3  30.89 
 
 
224 aa  83.6  0.000000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.618161  n/a   
 
 
-
 
NC_013517  Sterm_2266  HAD-superfamily hydrolase, subfamily IA, variant 3  28.12 
 
 
220 aa  83.6  0.000000000000002  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1614  HAD-superfamily hydrolase, subfamily IA, variant 3  27.54 
 
 
224 aa  83.2  0.000000000000003  Geobacter lovleyi SZ  Bacteria  normal  0.0147527  n/a   
 
 
-
 
NC_009012  Cthe_3073  HAD family hydrolase  29.73 
 
 
223 aa  83.2  0.000000000000003  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00582956  n/a   
 
 
-
 
NC_011138  MADE_03683  putative enzymatic protein  30.51 
 
 
232 aa  82.8  0.000000000000004  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1508  phosphoglycolate phosphatase  33.51 
 
 
228 aa  82  0.000000000000007  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.313556  normal  0.0200123 
 
 
-
 
NC_013525  Tter_0876  HAD-superfamily hydrolase, subfamily IA, variant 3  30.77 
 
 
215 aa  81.3  0.00000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011989  Avi_1034  hydrolase  31.67 
 
 
217 aa  80.9  0.00000000000001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1268  HAD family hydrolase  34.27 
 
 
215 aa  80.9  0.00000000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_13910  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  36.72 
 
 
232 aa  81.3  0.00000000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.491881  normal 
 
 
-
 
NC_011894  Mnod_0323  HAD-superfamily hydrolase, subfamily IA, variant 3  34.02 
 
 
258 aa  80.5  0.00000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4360  HAD-superfamily hydrolase, subfamily IA, variant 1  33.33 
 
 
223 aa  80.1  0.00000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2406  HAD family hydrolase  33.69 
 
 
219 aa  80.5  0.00000000000002  Magnetococcus sp. MC-1  Bacteria  normal  0.173268  normal  0.1338 
 
 
-
 
NC_013517  Sterm_2682  HAD-superfamily hydrolase, subfamily IA, variant 3  28.26 
 
 
226 aa  80.5  0.00000000000002  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0403  HAD-superfamily hydrolase, subfamily IA, variant 3  36.27 
 
 
215 aa  80.1  0.00000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_3898  HAD-superfamily hydrolase, subfamily IA, variant 3  30.43 
 
 
233 aa  80.5  0.00000000000002  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1550  HAD-superfamily hydrolase, subfamily IA, variant 3  34.92 
 
 
249 aa  80.5  0.00000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.204001 
 
 
-
 
NC_010003  Pmob_0452  HAD family hydrolase  26.6 
 
 
221 aa  80.1  0.00000000000003  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3556  HAD family hydrolase  35.59 
 
 
262 aa  79.7  0.00000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2488  HAD family hydrolase  30 
 
 
237 aa  79.3  0.00000000000004  Thermobifida fusca YX  Bacteria  normal  0.271509  n/a   
 
 
-
 
NC_010172  Mext_0990  HAD family hydrolase  32.91 
 
 
253 aa  79.3  0.00000000000004  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.480228 
 
 
-
 
NC_008639  Cpha266_2591  HAD family hydrolase  31.34 
 
 
220 aa  79.3  0.00000000000004  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.0000123522  n/a   
 
 
-
 
NC_011757  Mchl_0953  HAD-superfamily hydrolase, subfamily IA, variant 3  32.91 
 
 
253 aa  79.3  0.00000000000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0537  HAD-superfamily hydrolase, subfamily IA, variant 1  27.14 
 
 
260 aa  79  0.00000000000005  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_006369  lpl1096  hypothetical protein  28.24 
 
 
222 aa  79  0.00000000000006  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_014165  Tbis_1853  HAD-superfamily hydrolase  32.11 
 
 
213 aa  78.6  0.00000000000006  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp1093  hypothetical protein  28.43 
 
 
222 aa  78.6  0.00000000000007  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_4152  HAD family hydrolase  29.86 
 
 
217 aa  78.6  0.00000000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4498  HAD-superfamily hydrolase subfamily IA, variant 3  30.89 
 
 
223 aa  78.2  0.00000000000009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.511661  normal  0.0143777 
 
 
-
 
NC_013510  Tcur_2293  HAD-superfamily hydrolase, subfamily IA, variant 3  32.79 
 
 
218 aa  77.8  0.0000000000001  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000494788  n/a   
 
 
-
 
NC_010725  Mpop_4472  HAD-superfamily hydrolase, subfamily IA, variant 1  31.58 
 
 
223 aa  77.8  0.0000000000001  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4237  HAD family hydrolase  32.88 
 
 
248 aa  77.8  0.0000000000001  Rhodopseudomonas palustris BisB5  Bacteria  hitchhiker  0.00960992  normal  0.35717 
 
 
-
 
NC_013173  Dbac_2136  HAD-superfamily hydrolase, subfamily IA, variant 3  32.85 
 
 
219 aa  77.8  0.0000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.101925  n/a   
 
 
-
 
NC_011060  Ppha_2878  beta-phosphoglucomutase family hydrolase  25.67 
 
 
233 aa  77.4  0.0000000000001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6618  HAD-superfamily hydrolase, subfamily IA, variant 3  26.5 
 
 
217 aa  77  0.0000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.022243  hitchhiker  0.00896914 
 
 
-
 
NC_007404  Tbd_0945  putative 2-phosphoglycolate phosphatase  33.52 
 
 
226 aa  77.4  0.0000000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2877  beta-phosphoglucomutase  28.91 
 
 
219 aa  76.6  0.0000000000002  Spirosoma linguale DSM 74  Bacteria  normal  0.0767657  normal 
 
 
-
 
NC_009441  Fjoh_2690  HAD family hydrolase  26.7 
 
 
221 aa  77.4  0.0000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.365385  n/a   
 
 
-
 
NC_009049  Rsph17029_2938  HAD family hydrolase  34.9 
 
 
230 aa  76.6  0.0000000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000391  2-deoxyglucose-6-phosphate hydrolase YniC  28.11 
 
 
218 aa  76.6  0.0000000000003  Vibrio sp. Ex25  Bacteria  normal  0.0106831  n/a   
 
 
-
 
NC_013037  Dfer_4825  HAD-superfamily hydrolase, subfamily IA, variant 3  29.87 
 
 
224 aa  76.6  0.0000000000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
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