Gene Syncc9605_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1319 
Symbol 
ID3736081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1232771 
End bp1233550 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content61% 
IMG OID637775909 
ProductHAD family hydrolase 
Protein accessionYP_381628 
Protein GI78212849 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0765605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGTTGC TGCTCCTCAA CGTGAACAGG CTTTCAGCGG TCTTTTGGGA TGTGGATGGC 
ACCTTGGCCG ACACGGAAAT GGACGGTCAT CGACCGGCCT TCAACATGGC TTTCGAGGAG
CTGGATCTCC CCTTCGTTTG GGATGAAGCG CTGTACAACC GGCTGCTGGC GATTCCCGGT
GGACTCCGCA GGGTGAAGCT TCACGCTGAA GCCTGTGGTG TGGCCCTTAG TCAGCACCAG
CTGGCCCAGG TGCGAGATCG AAAACGCTTC CATTATTTAG AACGGGTTCG CCAAGGGCAT
GTGCAGCTCC GCCCTGGTGT GAAAAGGCTT TTGCAGGAGT TGAGTCGGTC AGGCGTGCAG
CAGTGGATCG TCACCTCCAG CGGATCAGCG TCGGTGATGG TTCTGCTGGA ACAGTTCCAG
CAGCAGATCC CCTGCTTCGA TGGGGTAGTG ACGTCGGATG ACGTTGCTGC GGGCAAGCCA
GCACCGGACG GCTATCTGCT CGCCCTCAAA CGCAGTGGGG CCAACAGTGT TGCCAGCCTT
GCCGTCGAGG ATTCTGCGGC GGGTCTTTCG GCAGCCAGAG CCGCAGGTTT GCGTTGTCTG
CTGACCCCAT CCCCCTGGGA TGCCGAAGCC CTGCGCGATT CCGTTGGCGA GGCCACTGCA
GTGTTGGATC ACCTGGGGGA CCCGGGAGAG CCAGCAACGG TGCTTTCCGG CGCCTCTTGC
CAGGAGGAGG CAGTGACGCT GAAGTATCTG GAGACTCTGT TGTCGGTACC GGATCGATGA
 
Protein sequence
MPLLLLNVNR LSAVFWDVDG TLADTEMDGH RPAFNMAFEE LDLPFVWDEA LYNRLLAIPG 
GLRRVKLHAE ACGVALSQHQ LAQVRDRKRF HYLERVRQGH VQLRPGVKRL LQELSRSGVQ
QWIVTSSGSA SVMVLLEQFQ QQIPCFDGVV TSDDVAAGKP APDGYLLALK RSGANSVASL
AVEDSAAGLS AARAAGLRCL LTPSPWDAEA LRDSVGEATA VLDHLGDPGE PATVLSGASC
QEEAVTLKYL ETLLSVPDR