Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1517 |
Symbol | |
ID | 4038320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1639030 |
End bp | 1639848 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637976901 |
Product | HAD family hydrolase |
Protein accession | YP_583669 |
Protein GI | 94310459 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00550293 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000688846 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCACCG GAACGGCGGC AAGACCCAAG CTCGAGGCGC TGCTGTGGGA CGTCGACGGC ACCCTCGCCG AGACCGAGCG CGACGGGCAT CGGGTCGCGT TCAACCTCGC CTTCGAGGCC TTCGGCCTGC CTTGGCGTTG GGACGATGCG CGCTATGGCG AGCTCCTGCG CGTGACCGGC GGGCGCGAGC GCCTGATGCA CGACATGGAC AGCCGGCCCG ACGCACCGCC CATGGCGAGC GAGCGCGATG CGCTGGCGCG CGCGCTGCAC GCGAAGAAGA ACACCTTGTA TGCTGAACTG GTTGCCGATG CCGGCATTCC GCTGCGCGAC GGCGTTCTGG AACTGATGCG CGAGTGCCGC GACCACGGCG TGCGCATGGC CGTCGCCACG ACCACCAGCC GCTCCAACCT CGAAGCCTTG TTGCGCAAGC ACATGGGCAA CCGGTGGGCC GGCTGGTTCG GTGCCATCGT GTGCGGCGAG GACGTGGAGC GCAAGAAGCC CGATCCCGAG GTCTTCGTCA AGGCCTTGCG GGCGCTGGGC GTCGGCCCAC ACCAGGCCGT CGCCATCGAA GACTCGCCCG GCGGCGTGGC GGCGGCGCGC GCCGCCGATT GCCCGGTGGT GGTCACCCGC AGCTTCTACT TCGCCAAGGC ACCGATCGAG GGTGCCATCG CCGTCGGCCC CGGCCTGCAC GCCCGCGAGG GCTGGCGCCC GGCGCTGGCC GCGCGGGTGA AGCCGCCGCA GTCGCAGGGG CAGCGCGTCG GCCTCGCCGA CATCGCCGAC TGGTTTGCGC AACGGGACAC GATCTGCGAC TACCCGTAG
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Protein sequence | MTTGTAARPK LEALLWDVDG TLAETERDGH RVAFNLAFEA FGLPWRWDDA RYGELLRVTG GRERLMHDMD SRPDAPPMAS ERDALARALH AKKNTLYAEL VADAGIPLRD GVLELMRECR DHGVRMAVAT TTSRSNLEAL LRKHMGNRWA GWFGAIVCGE DVERKKPDPE VFVKALRALG VGPHQAVAIE DSPGGVAAAR AADCPVVVTR SFYFAKAPIE GAIAVGPGLH AREGWRPALA ARVKPPQSQG QRVGLADIAD WFAQRDTICD YP
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