Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1484 |
Symbol | cbbY |
ID | 4784082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 1599967 |
End bp | 1600740 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640090051 |
Product | haloacid dehalogenase |
Protein accession | YP_001020681 |
Protein GI | 124266677 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.514428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCCG CCTTGCTGTG GGATGTGGAT GGCACCATGG CCGAGACCGA ACGCGACGGT CATCTCGTCG CGTTCAACGA AGCCTTCGAG GCGCTCGGCC TGCCGTGGCG ATGGAGCGTC GAACGCTACA CCGAGCTGCT GCGCGTGACC GGGGGACGCG AGCGCCTGCT GCACGACATG ACCACGCAGG CCGACGCTCC TGCCGGCGCG GCCGAGCGCG ACCGTCTGGC CGCGGCACTG CATGCCGAGA AGAACCGCCG CTACGGCCAG CTCGTGGAGC GCGGCGCGAT CGCGCTGCGC CCCGGCGTGC TGCGGCTGAT GAACGAGGCC ACGGCGAGCG GGGTGCAGCT GGCCATTGCC ACAACCACGT CGCGCGTGAA CCTGGAGGCC TTGCTGGGCG CGCAGCTCGG CACGAACTGG CCCACACGCT TCGCGGCCAT CGTCTGCGGC GAGGACGCGC CGGTGAAGAA GCCCGACCCG CAGGTCTACC TGCGATGCCT GGATGCGCTG CAACTCGACG CCGACGAGAC GCTCGCGATC GAGGATTCGC CGAACGGACT GGCCGCGGCC CGCGCCGCCG GTATCGCGAC GCTGGTGACG CGCAGCCTGA ATTTCGCGAG CCACGCCTTC GAGGGCGCGC TCGCTGTCTG CGACGACCTG GACCACCCGG CGGCGCCGTC GCCGCACCTA AAGGGCGCGC GCGCCGCGCG CATCGACCTC GCACTGCTGC GGCATTGGCA TGCCACGTGG TGGCAGGAGC CGCTGCGCGC CTGA
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Protein sequence | MLAALLWDVD GTMAETERDG HLVAFNEAFE ALGLPWRWSV ERYTELLRVT GGRERLLHDM TTQADAPAGA AERDRLAAAL HAEKNRRYGQ LVERGAIALR PGVLRLMNEA TASGVQLAIA TTTSRVNLEA LLGAQLGTNW PTRFAAIVCG EDAPVKKPDP QVYLRCLDAL QLDADETLAI EDSPNGLAAA RAAGIATLVT RSLNFASHAF EGALAVCDDL DHPAAPSPHL KGARAARIDL ALLRHWHATW WQEPLRA
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