Gene Smal_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0452 
Symbol 
ID6478404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp531924 
End bp532607 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content69% 
IMG OID642729597 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_002026840 
Protein GI194364230 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA TCGCTGCGCT GCCGTTCCTG CCCGACGCCA TCATCTTCGA CATGGACGGC 
CTGATGATCG ACAGCGAGCG GGTCTCGCTT GCCTGCTGGA GCCAGGCCGC CGATGAGTTC
GGCCTGGGCC TGGACGAAAC GGTGTTCCTG CGCATGGTCG GACTCGGCGA CCGCGATACG
CACGCGTTGC TGCGTGTGCA GGGTGTCGAG GACAGCGTGA TCGAAGCCGT GGCCGCACGC
TGCCACGATC TCTACGAGGA ACGCACGCAG ACCGGCCTGC CGCTGCGGCC GGGCATCCTG
GAGCTGCTGG AACTGCTGAA GGCGCACGCG ATACCGCGTG CGGTGGCAAC CACCACGCGG
CAGCCGCGGG CCAACCGCAA GCTGTCCGCC GCCGGCCTGC TGCCGTATTT CGATGCGGTG
ATCACCAGCG GCGACGTGGC ACGGCCGAAG CCGGCGCCGG ACATCTACCT GCTGGCCGCG
CAGCGGCTGG GCCAGGTGCC CGAGCGCTGC CTGGCGCTGG AAGACTCACC GGCCGGCACG
CGCGCAGCGC TGGCTGCCGG CATGACCGTG ATCCAGGTGC CGGACCTGGT GCATCCGGAC
GAAGAGCTGC GCGCATTCGG ACACCGCATC GTCGGCTCGC TGCTGGACGC GCACGCGCTG
CTGGTGCCGT TGCTGCCGAA ATAA
 
Protein sequence
MTTIAALPFL PDAIIFDMDG LMIDSERVSL ACWSQAADEF GLGLDETVFL RMVGLGDRDT 
HALLRVQGVE DSVIEAVAAR CHDLYEERTQ TGLPLRPGIL ELLELLKAHA IPRAVATTTR
QPRANRKLSA AGLLPYFDAV ITSGDVARPK PAPDIYLLAA QRLGQVPERC LALEDSPAGT
RAALAAGMTV IQVPDLVHPD EELRAFGHRI VGSLLDAHAL LVPLLPK