| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4341 |
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| Symbol | |
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| ID | 3912154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4925799 |
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| End bp | 4926545 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637886245 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_487939 |
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| Protein GI | 86751443 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0493927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCAT CAGCATTGAT CTTCGACGTC GACGGGACGC TCGCAGAGAC CGAGGAGCTT
CACCGGCAGG CCTTCAACGA GACCTTTGCG GCGGAGGCGC TGCCGTGGAA TTGGGACGCA
CCAGCCTATC GGAGACTGCT GGAGGTTGCC GGCGGCAAGG AGCGCATCGC GCATTTTCTG
CAGTCGCAGC CGGACGGCGC GGCGCGGGCC GTGGGCCGCA TCGCCGAACT GCATGCGGCC
AAGACCGGCC GCTATACCGC CCTGGTGGCC GCCGGCGCGA CGCTGCGGCC CGGCGTTGCG
CGGCTGATCC GGGAGGCCAA GGCGGCCGGC GTGCGGCTGG CGATTGCCAC CACCACCAGC
CTGCCGAATG TCGAGGCGCT GCTCGGCGCG TCGCTGGGGC AGGGCGCGAT GACGTTGTTC
GACGTGGTCG GCGCCGGCGA TGTCGTGCCG GCCAAGAAGC CCGCCGCGGA TATCTACCAA
TATGTGCTGG AGCGCCTCGC GCTGCCGGCC GCGCGCTGTG TCGCCTTCGA GGACTCCACC
AACGGCGTGC GGGCCGCGCT CGGCGCCGGC CTCGCCACCA TCGTGACGCC GGGGATCTAC
ACCGAGGGCG ATGATTTTTC CGGCGCGCTG GCGGTGCTGA GCGATCTCGG CGAGCCGGAG
GCGCCGTATC GGCATCTCGC GGGCGCCGGC GCCGCCGACA CGATGGTGAC GCTCGACGCG
CTCGGACGCT GGCTCGAATC CGCCTGA
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| Protein sequence | MTPSALIFDV DGTLAETEEL HRQAFNETFA AEALPWNWDA PAYRRLLEVA GGKERIAHFL
QSQPDGAARA VGRIAELHAA KTGRYTALVA AGATLRPGVA RLIREAKAAG VRLAIATTTS
LPNVEALLGA SLGQGAMTLF DVVGAGDVVP AKKPAADIYQ YVLERLALPA ARCVAFEDST
NGVRAALGAG LATIVTPGIY TEGDDFSGAL AVLSDLGEPE APYRHLAGAG AADTMVTLDA
LGRWLESA
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