| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5014 |
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| Symbol | |
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| ID | 6412706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5397997 |
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| End bp | 5398743 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642714897 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_001993978 |
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| Protein GI | 192293373 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.652483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACCTT CTGCACTGAT CTTCGACGTC GACGGCACGC TCGCCGAGAC CGAAGAACTG
CACCGTCAGG CCTTCAACGC CACCTTCGCG GCCGAGCAAC TGCCGTGGCA TTGGGATGCG
ACGCTGTATC GCAAGCTGCT CGACGTCACC GGCGGCAAGG AGCGGATCGC TCACTTCCTG
AAGTCGGAAC CGGATGGCGC CGAGCGGGCG GCCGATCGGA TCCCCGAACT GCACCGGGCC
AAGACCGACC GCTATACCGC GCTGGTCGCC GCCGGCACCG CGCTGCGCCC CGGCGTGGCG
CGGCTGATCC GCGAGGCCAA GGCGGCCGGC GTGAAGCTTG GGATCGCTAC CACCACCAGC
CTGCCGAATG TCGAGGCGCT GCTGCAGTCT TCGCTGGGGC CGGACGCGAT GGCGCTGTTC
GACGCGGTCG GCGCCGGCGA CGTGGTGCCG GCCAAGAAGC CGGCGCCGGA CATCTACCTC
TACGTGCTCG ACGCCCTGAA GCTGCCGGCG GCCGATTGCG TCGCGTTCGA GGATTCCACC
AACGGGGTCC GCGCCGCGCG CGCCGCCGGG CTGCCGACCA TCGTCACCCC AGGGCTCTAT
ACCGAGGGCG ACGATTTCCC CGGTGCGCTG GCGGTGCTCA GCGATCTCGG CGAGCCGGAT
GCGCCGTATC GGCATCTTGC CGGCGTTGGG GCCGGCGATT CCCTGGTGAC GCTGGCCGCG
CTGGCGCGCT GGTGCCGCTC GGCCTGA
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| Protein sequence | MLPSALIFDV DGTLAETEEL HRQAFNATFA AEQLPWHWDA TLYRKLLDVT GGKERIAHFL
KSEPDGAERA ADRIPELHRA KTDRYTALVA AGTALRPGVA RLIREAKAAG VKLGIATTTS
LPNVEALLQS SLGPDAMALF DAVGAGDVVP AKKPAPDIYL YVLDALKLPA ADCVAFEDST
NGVRAARAAG LPTIVTPGLY TEGDDFPGAL AVLSDLGEPD APYRHLAGVG AGDSLVTLAA
LARWCRSA
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