Gene Daro_3629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3629 
Symbol 
ID3567995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3903629 
End bp3904330 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID637682102 
ProductHAD family hydrolase 
Protein accessionYP_286828 
Protein GI71909241 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.956312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACAC TTCAAGCCCT GATCTTCGAC GTCGACGGCA CGCTGGCCGA CACCGAGCGC 
GACGGCCATC GCCCCGCCTT CAATGCGGCC TTTGCCGAGC ACGGCCTGGA CTGGTACTGG
GATGAAATGC TGTACGGCGA ATTGCTCGCC ATCGCCGGCG GCAAGGAGCG CATCCGTCAC
TACGCCCCCC GCCGCGCCCC CGACATTGCT GCCCGGCCCG AGTTCGACTG CCTCGTCCGC
GACCTGCACG CCGCTAAGAC ACGCCACTAC CTGCGCCTCG TCGAATCCGC CAGCCTGCCG
CTCCGGCCCG GCGTCGCGGC GCTGATCCAG CAAGCCCGCC AACGCGGCCT ACGCCTCGCC
ATCGCCACCA CGACCACTCC GGAAAACGTC ACCACGCTGC TCAACGCCAC ACTCGGGGCG
GAGTCACCCG ACTGGTTTGA AGTGATCGGT GCCGGCGACA TCGTTCCCCA CAAGAAGCCG
GCGCCCGACA TTTACCGCTG GGTGCTCGAT CGTCTCGCCC TGCCGGCCGA AAATTGCCTG
GCCATCGAAG ATTCAGCCAA CGGCCTGCAA GCCGCCCGCG CCGCCGGGAT GCGCTGCCTC
GTTACGCCCA ACAACTACAC AGCCGGCGAG GATTTCAGCG GTGCATGGCA GGTGCTGTCG
GACCTGCTGG AGGTTGATCT CTCCGCCATC GCCACCCCAT AA
 
Protein sequence
MHTLQALIFD VDGTLADTER DGHRPAFNAA FAEHGLDWYW DEMLYGELLA IAGGKERIRH 
YAPRRAPDIA ARPEFDCLVR DLHAAKTRHY LRLVESASLP LRPGVAALIQ QARQRGLRLA
IATTTTPENV TTLLNATLGA ESPDWFEVIG AGDIVPHKKP APDIYRWVLD RLALPAENCL
AIEDSANGLQ AARAAGMRCL VTPNNYTAGE DFSGAWQVLS DLLEVDLSAI ATP