| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2878 |
|---|
| Symbol | |
|---|
| ID | 6461646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 2963009 |
|---|
| End bp | 2963710 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642729023 |
|---|
| Product | beta-phosphoglucomutase family hydrolase |
|---|
| Protein accession | YP_002019638 |
|---|
| Protein GI | 194337844 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02009] beta-phosphoglucomutase family hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACA ACAACAAACA GGCCTTTATT TTCGACATGG ATGGCGTGCT GACCGATAAT
ATGCGCTTCC ATGCCGATTC ATGGGTTGAA CTCTTCAGCG ATTTTGGCCT TCAGGGGCTT
GACGCTGAAC GCTACCTGGT GGAAACCGCA GGTATGAAAG GCCTTGACGT TCTCCGTTAC
TTCCTCGACC CGCAGATCAG TGAGAGGGAG GCTGAACGCT TGACCGAACT CAAGGACTTT
CTCTACAGGG TGATGTCGCG AGAGCGCATC AAAGCGATGC CTGGCCTTGG AGGGTTTCTT
GATGCCGCTG AAAAACGGGG AGTCCAGCTT GGAATCGGCA CCGGTGCAGG CCCGAAAAAC
ATTGAGTATG TCCTTGGCCT GCTGAACATG ACCAATACCT TCCAAGCAAT TGTTGATCCC
TCACAGGTGC GCCACGGCAA ACCGGAACCT GATATATTTT TGCGTGCAGC CTCCCTGCTC
AACGCCGCAC CTTCTGATTG CATTGTCTTT GAAGATGCTC TGCCGGGAGT TGAGGCTGCC
CGGAAAGCGG GTATGCAGTG CGTTGCGGTG ACAACAACCA ACCAGGCCGA TGCATTCAGC
CAGTTCGACA ATGTCCTGCA GATCATCGAC GACTTTACCT CCCTTTGCCC TGATGATCTC
TTGAGAAAAC TCAATGAGAA GCAACCCATG ACCCTCTTAT AA
|
|---|
| Protein sequence | MLNNNKQAFI FDMDGVLTDN MRFHADSWVE LFSDFGLQGL DAERYLVETA GMKGLDVLRY
FLDPQISERE AERLTELKDF LYRVMSRERI KAMPGLGGFL DAAEKRGVQL GIGTGAGPKN
IEYVLGLLNM TNTFQAIVDP SQVRHGKPEP DIFLRAASLL NAAPSDCIVF EDALPGVEAA
RKAGMQCVAV TTTNQADAFS QFDNVLQIID DFTSLCPDDL LRKLNEKQPM TLL
|
|---|
| |