| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_32070 |
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| Symbol | |
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| ID | 8388531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3475825 |
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| End bp | 3476508 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977234 |
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| Product | haloacid dehalogenase superfamily enzyme, subfamily IA |
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| Protein accession | YP_003135007 |
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| Protein GI | 257057175 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.466176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.444114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCG CCGCGGTTGT GTTCGATATG GACGGAGTCC TGGTCGACAG CGAACACCTG
TGGGAAGAGA ACTGGATCGC CTACGCGGCG AAGTACGGCG TCGAATGGAC ATCCGAGGAC
ACCTCGACCG TTCAGGGCAT GAGCGCCCCC GAGTGGTCCG CCTACCTCGC GAAGCGCAGC
GGTACCCCCG AAACCCCCGA GCGGGTCGAA CGTACCGTGG TGGACGGCAT GATCGCGGCC
ATCGCGGACG GCAGGGCGCC GCTGCTGCCG GGGGCCGACA GGATGGTCAC CGACGTCAGC
GCCAAAGCTC CCATCGCGTT GGCGTCGTCG GCGCCGCGCA GGGTGATCGA CGCCGTCCTG
GCCACCTACG GACTGACCGA CGAGTTCACC GCCACGGTGT CCAGCGCGGA GGTCCCGCGC
GGCAAACCGA GCCCTGATGT GTACCTGGAG GCGGCTTCCC GCCTCGGCCG CAGGGGTGAC
GAATGCCTGG GCGTGGAGGA CTCCAGCAAC GGCATCCGCG CGGCCGCGGC GGCCGGCCTC
ACCGTCGTCG CCCTGCCGAA CCCCACGTAC CCACCCAAAC CCGACGCACT CGAACTCGCC
ACCGTCGTGG TCGACAGCAA CGACGCCGCA CGGCGCGCCC TGCTCGACCA CCTCGCCGAC
AACGTCGCCG GGAGGACCGC ATGA
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| Protein sequence | MALAAVVFDM DGVLVDSEHL WEENWIAYAA KYGVEWTSED TSTVQGMSAP EWSAYLAKRS
GTPETPERVE RTVVDGMIAA IADGRAPLLP GADRMVTDVS AKAPIALASS APRRVIDAVL
ATYGLTDEFT ATVSSAEVPR GKPSPDVYLE AASRLGRRGD ECLGVEDSSN GIRAAAAAGL
TVVALPNPTY PPKPDALELA TVVVDSNDAA RRALLDHLAD NVAGRTA
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