Gene VEA_000391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000391 
Symbol 
ID8558697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp443979 
End bp444635 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content40% 
IMG OID646408057 
Product2-deoxyglucose-6-phosphate hydrolase YniC 
Protein accessionYP_003287544 
Protein GI262395691 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0106831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATACG CTGCGGTCTT TGATATGGAC GGGTTGCTGA TTGATTCAGA ACCTTTGTGG 
AAGGAAGCGG AAAAGCAGGT GTTTTCATCA GTTGGCGTCC AAGTGACCGA AGTATTATCA
AAGCAAACTG CGACGATGAC GACAGGTGAA GTAACAAGGT TTTGGTATGA ACGTAATCCT
TGGCAAGAAA AGAGCCTAGA AGAAGTAGAG AATGCTGTTG TGGATAAAGT GGAGACATTA
ATAATTGAAA AAGGATGCGA ATTAGAGGGT GTTACAGAAA CACTCAAATT GCTTAAGGAA
AAAGGGTTTA AGATAGGGCT GTCTACTAAT TCACCTTATC AACTCATTCC CACCATTTTG
AACAAACTCG GTATTGCCAG TTACTTTGAC GCGATATCAT CGTCAGACGA TGTAGAACAG
GGCAAGCCAG AGCCAGATGT CTACCTTTCA ACAATCAATA AACTAGGTGT AGATTCAAGT
AACTGTATTG CCTTTGAAGA CTCTTATTCG GGTATGCTTG CGGCAACACG AGCAAACATA
AAAACAGTCG TGATACCTCA ACCTGATAAG TTCTACCAAG AGTTTAATGA AGCCAGTCTA
AAGCTGCGAA AGCTATCAGA GTTTAATGAA AGCCATTTAG TGGATTTAAT AGGATAA
 
Protein sequence
MIYAAVFDMD GLLIDSEPLW KEAEKQVFSS VGVQVTEVLS KQTATMTTGE VTRFWYERNP 
WQEKSLEEVE NAVVDKVETL IIEKGCELEG VTETLKLLKE KGFKIGLSTN SPYQLIPTIL
NKLGIASYFD AISSSDDVEQ GKPEPDVYLS TINKLGVDSS NCIAFEDSYS GMLAATRANI
KTVVIPQPDK FYQEFNEASL KLRKLSEFNE SHLVDLIG