More than 300 homologs were found in PanDaTox collection
for query gene Namu_2787 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_2787  HAD-superfamily hydrolase, subfamily IA, variant 3  100 
 
 
230 aa  455  1e-127  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00137861  hitchhiker  0.0000132599 
 
 
-
 
NC_013947  Snas_4498  HAD-superfamily hydrolase subfamily IA, variant 3  45.29 
 
 
223 aa  186  2e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.511661  normal  0.0143777 
 
 
-
 
NC_013093  Amir_2212  HAD-superfamily hydrolase, subfamily IA, variant 3  48.8 
 
 
220 aa  173  1.9999999999999998e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3473  HAD family hydrolase  45 
 
 
243 aa  161  7e-39  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_22200  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  45.33 
 
 
217 aa  155  4e-37  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.172111  normal 
 
 
-
 
NC_009338  Mflv_3054  HAD family hydrolase  44.24 
 
 
224 aa  154  1e-36  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.751068  normal  0.223571 
 
 
-
 
NC_013595  Sros_5916  HAD family hydrolase  42.65 
 
 
218 aa  149  3e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0345843  normal  0.0351614 
 
 
-
 
NC_013510  Tcur_2293  HAD-superfamily hydrolase, subfamily IA, variant 3  45.25 
 
 
218 aa  139  3e-32  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000494788  n/a   
 
 
-
 
NC_009953  Sare_2349  HAD family hydrolase  47.31 
 
 
215 aa  139  3e-32  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.355354 
 
 
-
 
NC_014165  Tbis_1853  HAD-superfamily hydrolase  40.28 
 
 
213 aa  137  2e-31  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3148  HAD family hydrolase  44.91 
 
 
228 aa  137  2e-31  Mycobacterium sp. MCS  Bacteria  normal  0.0274068  n/a   
 
 
-
 
NC_009077  Mjls_3160  HAD family hydrolase  44.91 
 
 
228 aa  137  2e-31  Mycobacterium sp. JLS  Bacteria  normal  0.0720917  normal  0.533727 
 
 
-
 
NC_008705  Mkms_3210  HAD family hydrolase  44.91 
 
 
228 aa  137  2e-31  Mycobacterium sp. KMS  Bacteria  normal  0.742759  normal  0.278604 
 
 
-
 
NC_014210  Ndas_1550  HAD-superfamily hydrolase, subfamily IA, variant 3  39.82 
 
 
249 aa  135  4e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.204001 
 
 
-
 
NC_007777  Francci3_2637  HAD family hydrolase  44.56 
 
 
286 aa  135  6.0000000000000005e-31  Frankia sp. CcI3  Bacteria  normal  0.403398  normal  0.292856 
 
 
-
 
NC_009380  Strop_2232  HAD family hydrolase  48.13 
 
 
233 aa  135  6.0000000000000005e-31  Salinispora tropica CNB-440  Bacteria  normal  0.470588  normal 
 
 
-
 
NC_013169  Ksed_13910  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  39.81 
 
 
232 aa  134  8e-31  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.491881  normal 
 
 
-
 
NC_013757  Gobs_2673  HAD-superfamily hydrolase, subfamily IA, variant 3  41.4 
 
 
248 aa  131  7.999999999999999e-30  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.649761  n/a   
 
 
-
 
NC_013441  Gbro_2452  HAD-superfamily hydrolase, subfamily IA, variant 3  39.13 
 
 
232 aa  130  2.0000000000000002e-29  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4889  HAD family hydrolase  44.22 
 
 
233 aa  127  1.0000000000000001e-28  Frankia sp. EAN1pec  Bacteria  normal  0.351284  normal  0.0730929 
 
 
-
 
NC_008699  Noca_2632  HAD family hydrolase  40.4 
 
 
218 aa  127  1.0000000000000001e-28  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7385  HAD-superfamily hydrolase, subfamily IA  41.28 
 
 
248 aa  125  8.000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2412  HAD-superfamily hydrolase, subfamily IA, variant 3  36.65 
 
 
222 aa  122  6e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1824  HAD family hydrolase  41.59 
 
 
222 aa  120  1.9999999999999998e-26  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2146  HAD-superfamily hydrolase, subfamily IA, variant 3  39.34 
 
 
213 aa  119  3e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1481  HAD-superfamily hydrolase, subfamily IA, variant 3  41.23 
 
 
233 aa  119  3.9999999999999996e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2245  HAD-superfamily hydrolase, subfamily IA, variant 3  42.71 
 
 
247 aa  118  7.999999999999999e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.56873  normal 
 
 
-
 
NC_011886  Achl_1913  HAD-superfamily hydrolase, subfamily IA, variant 3  37.76 
 
 
245 aa  110  2.0000000000000002e-23  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000014808 
 
 
-
 
NC_009664  Krad_1843  HAD-superfamily hydrolase, subfamily IA, variant 3  37.56 
 
 
241 aa  104  1e-21  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.101722  normal 
 
 
-
 
NC_014151  Cfla_2008  HAD-superfamily hydrolase, subfamily IA, variant 3  39.66 
 
 
213 aa  103  3e-21  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.296794  normal 
 
 
-
 
NC_013521  Sked_20940  haloacid dehalogenase superfamily enzyme, subfamily IA  36.36 
 
 
273 aa  102  6e-21  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.650807 
 
 
-
 
NC_011004  Rpal_4817  HAD-superfamily hydrolase, subfamily IA, variant 3  37.91 
 
 
235 aa  101  8e-21  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.821962  n/a   
 
 
-
 
NC_008578  Acel_1175  HAD family hydrolase  38.3 
 
 
263 aa  101  9e-21  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2170  HAD family hydrolase  36.21 
 
 
263 aa  100  2e-20  Arthrobacter sp. FB24  Bacteria  normal  0.156461  n/a   
 
 
-
 
NC_008786  Veis_2075  HAD family hydrolase  35.51 
 
 
217 aa  99.8  3e-20  Verminephrobacter eiseniae EF01-2  Bacteria  normal  decreased coverage  0.00099021 
 
 
-
 
NC_013721  HMPREF0424_1278  HAD hydrolase, family IA, variant 3  32.49 
 
 
247 aa  97.8  1e-19  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_007778  RPB_1286  HAD family hydrolase  35.47 
 
 
229 aa  96.3  4e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_3073  HAD family hydrolase  32.28 
 
 
223 aa  96.3  4e-19  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00582956  n/a   
 
 
-
 
NC_009441  Fjoh_2690  HAD family hydrolase  31.35 
 
 
221 aa  95.5  5e-19  Flavobacterium johnsoniae UW101  Bacteria  normal  0.365385  n/a   
 
 
-
 
NC_013093  Amir_7029  HAD-superfamily hydrolase, subfamily IA, variant 3  35.05 
 
 
213 aa  95.5  6e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0935  HAD family hydrolase  32.26 
 
 
235 aa  95.5  6e-19  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.941543  normal 
 
 
-
 
NC_013205  Aaci_2469  HAD-superfamily hydrolase, subfamily IA, variant 3  34.8 
 
 
224 aa  95.1  7e-19  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.618161  n/a   
 
 
-
 
NC_013517  Sterm_2266  HAD-superfamily hydrolase, subfamily IA, variant 3  30.65 
 
 
220 aa  95.1  9e-19  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_11830  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  38.97 
 
 
246 aa  94.7  1e-18  Micrococcus luteus NCTC 2665  Bacteria  normal  0.0867005  n/a   
 
 
-
 
NC_011831  Cagg_1516  HAD-superfamily hydrolase, subfamily IA, variant 3  34.62 
 
 
227 aa  94.7  1e-18  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1305  beta-phosphoglucomutase  32.4 
 
 
223 aa  93.6  2e-18  Bifidobacterium longum DJO10A  Bacteria  normal  0.396501  n/a   
 
 
-
 
NC_009092  Shew_3425  2-deoxyglucose-6-phosphatase  34.04 
 
 
223 aa  93.2  3e-18  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000919178  normal 
 
 
-
 
NC_010338  Caul_3346  HAD family hydrolase  33.5 
 
 
221 aa  93.2  3e-18  Caulobacter sp. K31  Bacteria  normal  0.363754  normal 
 
 
-
 
NC_009921  Franean1_1853  HAD family hydrolase  35.18 
 
 
235 aa  92.4  5e-18  Frankia sp. EAN1pec  Bacteria  normal  0.147437  normal  0.0157174 
 
 
-
 
NC_009654  Mmwyl1_0641  HAD family hydrolase  30.81 
 
 
220 aa  92  7e-18  Marinomonas sp. MWYL1  Bacteria  normal  0.950078  normal  0.0427696 
 
 
-
 
NC_007947  Mfla_1729  HAD family hydrolase  34.22 
 
 
728 aa  92  7e-18  Methylobacillus flagellatus KT  Bacteria  normal  0.696153  hitchhiker  0.000289006 
 
 
-
 
NC_004347  SO_0431  2-deoxyglucose-6-phosphatase  31.18 
 
 
217 aa  91.7  8e-18  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007406  Nwi_0553  HAD family hydrolase  35.18 
 
 
247 aa  91.7  8e-18  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0780  HAD family hydrolase  32.04 
 
 
227 aa  91.3  1e-17  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1566  HAD family hydrolase  30.34 
 
 
216 aa  90.9  1e-17  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2267  HAD-superfamily hydrolase, subfamily IA, variant 3  28.29 
 
 
219 aa  90.9  2e-17  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3410  2-deoxyglucose-6-phosphatase  31.18 
 
 
217 aa  90.1  2e-17  Shewanella putrefaciens CN-32  Bacteria  normal  0.0110715  n/a   
 
 
-
 
NC_009486  Tpet_1517  HAD family hydrolase  30.34 
 
 
216 aa  90.9  2e-17  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3933  HAD family hydrolase  34.78 
 
 
271 aa  90.9  2e-17  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0436  2-deoxyglucose-6-phosphatase  31.12 
 
 
218 aa  90.5  2e-17  Shewanella sp. MR-4  Bacteria  unclonable  0.0000000024214  normal 
 
 
-
 
NC_010322  PputGB1_1571  HAD family hydrolase  32.84 
 
 
714 aa  89.7  3e-17  Pseudomonas putida GB-1  Bacteria  normal  normal  0.882263 
 
 
-
 
NC_013457  VEA_000391  2-deoxyglucose-6-phosphate hydrolase YniC  30.11 
 
 
218 aa  89.4  4e-17  Vibrio sp. Ex25  Bacteria  normal  0.0106831  n/a   
 
 
-
 
NC_010338  Caul_0320  HAD family hydrolase  37.82 
 
 
241 aa  89.7  4e-17  Caulobacter sp. K31  Bacteria  normal  0.288784  normal 
 
 
-
 
NC_013159  Svir_32070  haloacid dehalogenase superfamily enzyme, subfamily IA  33.33 
 
 
227 aa  89.7  4e-17  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.466176  normal  0.444114 
 
 
-
 
NC_008577  Shewana3_0432  2-deoxyglucose-6-phosphatase  29.59 
 
 
218 aa  89  5e-17  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000498152  normal 
 
 
-
 
NC_009831  Ssed_0437  2-deoxyglucose-6-phosphatase  29.57 
 
 
221 aa  88.6  7e-17  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.000647119  hitchhiker  0.00000756317 
 
 
-
 
NC_009952  Dshi_1676  HAD-like hydrolase  36.7 
 
 
219 aa  88.6  7e-17  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.653252  normal  0.340852 
 
 
-
 
NC_013159  Svir_39300  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  30 
 
 
218 aa  87.8  1e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3906  2-deoxyglucose-6-phosphatase  30 
 
 
219 aa  87.8  1e-16  Shewanella baltica OS155  Bacteria  unclonable  0.000000000443869  n/a   
 
 
-
 
NC_008148  Rxyl_0905  HAD family hydrolase  35.2 
 
 
204 aa  87.4  1e-16  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.427836  n/a   
 
 
-
 
NC_013174  Jden_1197  HAD-superfamily hydrolase, subfamily IA, variant 3  29.32 
 
 
225 aa  87.8  1e-16  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0955551  normal  0.148864 
 
 
-
 
NC_002947  PP_2052  HAD superfamily hydrolase  32.35 
 
 
707 aa  87  2e-16  Pseudomonas putida KT2440  Bacteria  normal  0.380026  normal 
 
 
-
 
NC_009512  Pput_3689  HAD family hydrolase  32.35 
 
 
707 aa  87.4  2e-16  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6618  HAD-superfamily hydrolase, subfamily IA, variant 3  31.18 
 
 
217 aa  87.4  2e-16  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.022243  hitchhiker  0.00896914 
 
 
-
 
NC_011663  Sbal223_3849  2-deoxyglucose-6-phosphatase  30 
 
 
219 aa  87  2e-16  Shewanella baltica OS223  Bacteria  normal  0.184484  hitchhiker  0.000000000456944 
 
 
-
 
NC_008700  Sama_0381  2-deoxyglucose-6-phosphatase  32.97 
 
 
221 aa  87  2e-16  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0071153  normal  0.324571 
 
 
-
 
NC_009665  Shew185_3926  2-deoxyglucose-6-phosphatase  30 
 
 
219 aa  87  2e-16  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000000238408  n/a   
 
 
-
 
NC_010506  Swoo_0284  2-deoxyglucose-6-phosphatase  26.46 
 
 
221 aa  86.3  3e-16  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00458991 
 
 
-
 
NC_011369  Rleg2_0846  HAD-superfamily hydrolase, subfamily IA, variant 3  34.04 
 
 
231 aa  86.7  3e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.814852 
 
 
-
 
NC_007952  Bxe_B1761  HAD family hydrolase  35.26 
 
 
230 aa  86.7  3e-16  Burkholderia xenovorans LB400  Bacteria  normal  0.0120798  normal  0.0416472 
 
 
-
 
NC_013037  Dfer_2757  beta-phosphoglucomutase  31.02 
 
 
216 aa  86.3  3e-16  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.273253 
 
 
-
 
NC_008322  Shewmr7_3593  2-deoxyglucose-6-phosphatase  29.08 
 
 
218 aa  86.7  3e-16  Shewanella sp. MR-7  Bacteria  unclonable  0.0000011766  normal  0.672534 
 
 
-
 
NC_013132  Cpin_5088  beta-phosphoglucomutase  30.91 
 
 
219 aa  85.9  4e-16  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00016924  normal  0.408522 
 
 
-
 
NC_009901  Spea_0424  2-deoxyglucose-6-phosphatase  28.88 
 
 
222 aa  85.9  5e-16  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0717  HAD-superfamily hydrolase  37.04 
 
 
224 aa  85.5  6e-16  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2990  HAD-superfamily hydrolase  37.04 
 
 
224 aa  85.5  6e-16  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1060  haloacid dehalogenase, IA family protein  37.04 
 
 
224 aa  85.5  6e-16  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1609  HAD-superfamily hydrolase  37.04 
 
 
224 aa  85.5  6e-16  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2296  HAD-superfamily hydrolase  37.04 
 
 
224 aa  85.5  6e-16  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2602  HAD family hydrolase  34.6 
 
 
227 aa  85.5  6e-16  Pseudomonas putida F1  Bacteria  normal  normal  0.852152 
 
 
-
 
NC_011059  Paes_0473  HAD-superfamily hydrolase, subfamily IA, variant 3  36.65 
 
 
211 aa  85.5  7e-16  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.0000148872  normal 
 
 
-
 
NC_007434  BURPS1710b_1218  putative hydrolase  37.43 
 
 
762 aa  85.1  8e-16  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_1556  HAD family hydrolase  31.38 
 
 
232 aa  85.1  8e-16  Methanococcoides burtonii DSM 6242  Archaea  decreased coverage  0.0000000000353855  n/a   
 
 
-
 
NC_010505  Mrad2831_3556  HAD family hydrolase  34.78 
 
 
262 aa  85.1  9e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4133  HAD family hydrolase  38.25 
 
 
223 aa  85.1  9e-16  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_4825  HAD-superfamily hydrolase, subfamily IA, variant 3  33.84 
 
 
224 aa  85.1  9e-16  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2172  HAD family hydrolase  31.79 
 
 
710 aa  84.7  0.000000000000001  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4073  HAD-superfamily hydrolase subfamily IA, variant 3  32.28 
 
 
219 aa  84.7  0.000000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.358464  normal 
 
 
-
 
NC_003295  RSc0271  hypothetical protein  33.18 
 
 
229 aa  84.3  0.000000000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  0.586518  normal 
 
 
-
 
NC_011071  Smal_0452  HAD-superfamily hydrolase, subfamily IA, variant 3  34.12 
 
 
227 aa  83.6  0.000000000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
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