Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0780 |
Symbol | |
ID | 4810398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 943967 |
End bp | 944650 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640106197 |
Product | HAD family hydrolase |
Protein accession | YP_001037208 |
Protein GI | 125973298 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTATGA AAAAGTATAA GATTTCATTG GTTATTTTTG ATATGGACGG CTTGATGTTT GACACCGAAA GAATTGGAGT TTTAGGCTGG CATGAGGCGG CAAAATCTTT CGGTATAGAA ATAAAGCAAG AATTTTTAAG GGATATGACT GGTTTGAATG TCAAGAGCAT AGAGAAAGTT TTCAAAAAAT ATTACGGCAA CGATTTGCCC TTTTATGATA TAAGAGACCT TAGGGTGAAA TATGTGCTGG ATTATATTGA AAAAAACGGT ATGCCTGTAA AGCCGGGGCT TTTCGAACTT TTGGACTATC TTGACCATAG GGGCATAATG AAAGCTGTCG CAACGTCTAC AGAGCGAAAA AGAACGGAAA AATATTTAAC TTTGGCCGGC ATCAGAGAAC GTTTCGATGC CATTGTCTGC GGAGATGAAG TGGAGAGAGG AAAGCCCGAA CCCGACATAT TCCTTGAGGC TGCAAGAAGA ACAGGCAAAA GACCTGAAGA GTGTATTGTG CTGGAGGACT CTGCGAACGG CATAAAAGCG GCTTCAAGAG CCAAAATGTT TCCGGTGCTT ATTCCTGACA TGAGAAGACC TGACGAAGTC GAAGAATTGG TGTATAGAGA ATTAAAATCA CTGCATGAAG TGATAAATTT GCTTGAAAGC TTGAAAGAAG AAGTTGTGCT TTGA
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Protein sequence | MAMKKYKISL VIFDMDGLMF DTERIGVLGW HEAAKSFGIE IKQEFLRDMT GLNVKSIEKV FKKYYGNDLP FYDIRDLRVK YVLDYIEKNG MPVKPGLFEL LDYLDHRGIM KAVATSTERK RTEKYLTLAG IRERFDAIVC GDEVERGKPE PDIFLEAARR TGKRPEECIV LEDSANGIKA ASRAKMFPVL IPDMRRPDEV EELVYRELKS LHEVINLLES LKEEVVL
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