Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0520 |
Symbol | |
ID | 6374184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 546054 |
End bp | 546707 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642683037 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
Protein accession | YP_001958964 |
Protein GI | 189499494 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGGCT CAGGTATGAT ACAGGCGATA TTGTGGGACA ACGACGGACT TCTTGTCGAT AGCGAATCAG TCTTTTTTGA ACATACGAGA GCTGTCTTTG CCGATTTCGG ATATGAACTC GGCCGGGAGT ACTGGGGAAT CGAGTATCTT GGTAAAGCCA AACATACCCG GCAGGTCGCT GAAGAGTTTG GCATGGCACC TGATCTTATT GATCGTTTCA TTTCGTTGCG CGACCGCGAG TTTCTCAAAG CACTGCACCA TTCGGTTCCT CTGAGGCCGA AAGTTCGCGA AACACTCGAT ATGCTTTCAG GGCGGCTGAA ACAGGGGGTG GTAACGGGGA GTCCTCGCGA GAAAGTAGAG CTGATGCACC GTTCAAACGA TCTTGACGGT TATTTTGACC TGATAGTAAC CTGCGATGAT GTGACTGAAT CCAAGCCGCA TCCCGAGCCC TACCTGACCG CGCTTCACGT TCTCGGACTC AAACCGGAAA ACGTTCTTGC TGTTGAGGAT TCTGAAAGGG GGCTCGCATC AGCGTATGCA GCAGGAATAC CCTGTGTTGT CGTGCCGAAT TATCTGACGC GGGTTCAGGT TTTCGAGCAT GCGCATGCAA TTGAAGAAGA TGTTTGGGGC GTGTTGAAAC ACCTGGAATG GTGA
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Protein sequence | MFGSGMIQAI LWDNDGLLVD SESVFFEHTR AVFADFGYEL GREYWGIEYL GKAKHTRQVA EEFGMAPDLI DRFISLRDRE FLKALHHSVP LRPKVRETLD MLSGRLKQGV VTGSPREKVE LMHRSNDLDG YFDLIVTCDD VTESKPHPEP YLTALHVLGL KPENVLAVED SERGLASAYA AGIPCVVVPN YLTRVQVFEH AHAIEEDVWG VLKHLEW
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