Gene Cphamn1_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0520 
Symbol 
ID6374184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp546054 
End bp546707 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content51% 
IMG OID642683037 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_001958964 
Protein GI189499494 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGCT CAGGTATGAT ACAGGCGATA TTGTGGGACA ACGACGGACT TCTTGTCGAT 
AGCGAATCAG TCTTTTTTGA ACATACGAGA GCTGTCTTTG CCGATTTCGG ATATGAACTC
GGCCGGGAGT ACTGGGGAAT CGAGTATCTT GGTAAAGCCA AACATACCCG GCAGGTCGCT
GAAGAGTTTG GCATGGCACC TGATCTTATT GATCGTTTCA TTTCGTTGCG CGACCGCGAG
TTTCTCAAAG CACTGCACCA TTCGGTTCCT CTGAGGCCGA AAGTTCGCGA AACACTCGAT
ATGCTTTCAG GGCGGCTGAA ACAGGGGGTG GTAACGGGGA GTCCTCGCGA GAAAGTAGAG
CTGATGCACC GTTCAAACGA TCTTGACGGT TATTTTGACC TGATAGTAAC CTGCGATGAT
GTGACTGAAT CCAAGCCGCA TCCCGAGCCC TACCTGACCG CGCTTCACGT TCTCGGACTC
AAACCGGAAA ACGTTCTTGC TGTTGAGGAT TCTGAAAGGG GGCTCGCATC AGCGTATGCA
GCAGGAATAC CCTGTGTTGT CGTGCCGAAT TATCTGACGC GGGTTCAGGT TTTCGAGCAT
GCGCATGCAA TTGAAGAAGA TGTTTGGGGC GTGTTGAAAC ACCTGGAATG GTGA
 
Protein sequence
MFGSGMIQAI LWDNDGLLVD SESVFFEHTR AVFADFGYEL GREYWGIEYL GKAKHTRQVA 
EEFGMAPDLI DRFISLRDRE FLKALHHSVP LRPKVRETLD MLSGRLKQGV VTGSPREKVE
LMHRSNDLDG YFDLIVTCDD VTESKPHPEP YLTALHVLGL KPENVLAVED SERGLASAYA
AGIPCVVVPN YLTRVQVFEH AHAIEEDVWG VLKHLEW