Gene Noc_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0880 
Symbol 
ID3707186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp961897 
End bp962664 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content50% 
IMG OID637737383 
ProductHAD family hydrolase 
Protein accessionYP_342923 
Protein GI77164398 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTA AAGCATTAAT TTTTGATCTC GACGGAACCT TTGCCGAAAC GGAACGAGAT 
GGGCATCGGG TGGCGTTTAA CCGGGCCTTT GGCGAAGCGA GGGTAGGATG GCATTGGGAT
GTCGCTCTTT ATGGCCAATT GCTAGCGGTT ACTGGTGGTA AGGAGCGCAT TCGTTATTAC
TTAGAGCATT ATCAGCAGGA TTTCTGCCCT CCAGTGGCAT TAGATGAATT TATTGCTAAG
CTGCATCAGG CTAAGACCCG GTATTATATA GAATTGTTGA AAGAGCAGGG AATTCCCCTC
CGCCCGGGGG TGTTGCGGCT TCTTCATGCT GCCCGTGAGC AGGGTTTGCG GCTGGCTATT
GCGACCACGA CTACGCCAGA AAACGTAACC GCTTTAGTCA GTACCGGTAT CGGCCGCCAT
GCGCTTGATT GGTTCGACTG TATTGCCGCT GGGGATATAG TAAAGGCCAA GAAACCGGCG
CCGGATATTT ATGATTATTG TTTGGAACAG CTACAATTAG AAGCTGGTCA ATGCCTTGCT
TTCGAGGATT CTGCCAATGG TGTCCGTGCG GCGGTAGACG CAGGGATTAG AGTTGTAGTT
ACCGTTAATG ACTATACTCG CGATGAGGAT TTTGCGGGGG CGGATCTGGT ATTGAATCAT
CTGGGAGAGC CAGGCCAACC CTGCCAAGTA TTGAGTGGAA AATTGGATGG TTTTGAATAC
GTGAAGGTGG ATCTTTTGCG GCGCTTATCC GGAGAGGATG AAGAGTGA
 
Protein sequence
MKLKALIFDL DGTFAETERD GHRVAFNRAF GEARVGWHWD VALYGQLLAV TGGKERIRYY 
LEHYQQDFCP PVALDEFIAK LHQAKTRYYI ELLKEQGIPL RPGVLRLLHA AREQGLRLAI
ATTTTPENVT ALVSTGIGRH ALDWFDCIAA GDIVKAKKPA PDIYDYCLEQ LQLEAGQCLA
FEDSANGVRA AVDAGIRVVV TVNDYTRDED FAGADLVLNH LGEPGQPCQV LSGKLDGFEY
VKVDLLRRLS GEDEE