Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0880 |
Symbol | |
ID | 3707186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 961897 |
End bp | 962664 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637737383 |
Product | HAD family hydrolase |
Protein accession | YP_342923 |
Protein GI | 77164398 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTA AAGCATTAAT TTTTGATCTC GACGGAACCT TTGCCGAAAC GGAACGAGAT GGGCATCGGG TGGCGTTTAA CCGGGCCTTT GGCGAAGCGA GGGTAGGATG GCATTGGGAT GTCGCTCTTT ATGGCCAATT GCTAGCGGTT ACTGGTGGTA AGGAGCGCAT TCGTTATTAC TTAGAGCATT ATCAGCAGGA TTTCTGCCCT CCAGTGGCAT TAGATGAATT TATTGCTAAG CTGCATCAGG CTAAGACCCG GTATTATATA GAATTGTTGA AAGAGCAGGG AATTCCCCTC CGCCCGGGGG TGTTGCGGCT TCTTCATGCT GCCCGTGAGC AGGGTTTGCG GCTGGCTATT GCGACCACGA CTACGCCAGA AAACGTAACC GCTTTAGTCA GTACCGGTAT CGGCCGCCAT GCGCTTGATT GGTTCGACTG TATTGCCGCT GGGGATATAG TAAAGGCCAA GAAACCGGCG CCGGATATTT ATGATTATTG TTTGGAACAG CTACAATTAG AAGCTGGTCA ATGCCTTGCT TTCGAGGATT CTGCCAATGG TGTCCGTGCG GCGGTAGACG CAGGGATTAG AGTTGTAGTT ACCGTTAATG ACTATACTCG CGATGAGGAT TTTGCGGGGG CGGATCTGGT ATTGAATCAT CTGGGAGAGC CAGGCCAACC CTGCCAAGTA TTGAGTGGAA AATTGGATGG TTTTGAATAC GTGAAGGTGG ATCTTTTGCG GCGCTTATCC GGAGAGGATG AAGAGTGA
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Protein sequence | MKLKALIFDL DGTFAETERD GHRVAFNRAF GEARVGWHWD VALYGQLLAV TGGKERIRYY LEHYQQDFCP PVALDEFIAK LHQAKTRYYI ELLKEQGIPL RPGVLRLLHA AREQGLRLAI ATTTTPENVT ALVSTGIGRH ALDWFDCIAA GDIVKAKKPA PDIYDYCLEQ LQLEAGQCLA FEDSANGVRA AVDAGIRVVV TVNDYTRDED FAGADLVLNH LGEPGQPCQV LSGKLDGFEY VKVDLLRRLS GEDEE
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