| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3082 |
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| Symbol | |
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| ID | 6779939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3568050 |
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| End bp | 3568724 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642769077 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_002139880 |
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| Protein GI | 197119453 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.48861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTAACG CAGTCATCTT CGACTTTGAC GGCGTCATCG TGGACACCGA ACCGCTGCAC
TACAAGGCCT TCCAGGAACT GCTGGTGCCG CTTGGGCTTG GCTATTCCTG GGAAGAGTAC
CTGGACCGCT ACATCGGTTT CGACGACCGG GATGCCTTCC GCGAGGCCTT CGCTGTAGCC
GGGCGTGCCC TCTCCGACGG CGGGTTGAAG GAGCTGATCC ACGGCAAGGC GCAGGCGTTT
CTGCGCATCG TCTCTGTTGG TGTCGCCCCA TATGCCGGGG TGGTGGAGCT GATCCGCTCC
ATCTCCGGCA ACCTGCCGCT TGCCCTATGC AGCGGCGCCC TGCGCAGCGA CATAGACCCC
ATTCTGGCGC AGCTGGGCCT TTCCGACGCC TTTGACGTCA TGGTGACCGC CGACGAGGTG
GCGGCCAGCA AGCCGGACCC GGAAAGCTAT CGGCTAGCGG TCACGAGGCT TCAGGAGGCA
TTCCCCGGCA AGGTCGACGC TTCTGCCTCG ATCGCCATCG AGGACACCCC GGCGGGAATC
GCCTCGGCGT CCGGCGCAGG TCTCAAGGTG CTCGCCGTGA CCAACAGCTA TCCCAGGGAG
CGGCTGACCG GCGCCTGCCG GGTGCTCAAT TCCCTGTCCG GAGTCGATCT CGAAGGGCTT
CGCCTCCTCG TCTGA
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| Protein sequence | MLNAVIFDFD GVIVDTEPLH YKAFQELLVP LGLGYSWEEY LDRYIGFDDR DAFREAFAVA
GRALSDGGLK ELIHGKAQAF LRIVSVGVAP YAGVVELIRS ISGNLPLALC SGALRSDIDP
ILAQLGLSDA FDVMVTADEV AASKPDPESY RLAVTRLQEA FPGKVDASAS IAIEDTPAGI
ASASGAGLKV LAVTNSYPRE RLTGACRVLN SLSGVDLEGL RLLV
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