More than 300 homologs were found in PanDaTox collection
for query gene Lcho_3750 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_3750  HAD family hydrolase  100 
 
 
249 aa  498  1e-140  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.773366 
 
 
-
 
NC_008825  Mpe_A1484  haloacid dehalogenase  59.03 
 
 
257 aa  240  2e-62  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.514428 
 
 
-
 
NC_007973  Rmet_1517  HAD family hydrolase  60.29 
 
 
272 aa  238  5e-62  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00550293  decreased coverage  0.0000688846 
 
 
-
 
NC_007925  RPC_2894  HAD family hydrolase  50.49 
 
 
233 aa  180  2e-44  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.338332  normal  0.157794 
 
 
-
 
NC_008789  Hhal_1452  HAD family hydrolase  47.35 
 
 
241 aa  179  2.9999999999999997e-44  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0810  HAD family hydrolase  51.01 
 
 
241 aa  177  2e-43  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.731901  normal  0.645331 
 
 
-
 
NC_011761  AFE_1466  HAD-superfamily hydrolase, subfamily IA, variant 3  42.23 
 
 
254 aa  171  7.999999999999999e-42  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1182  HAD-superfamily hydrolase, subfamily IA, variant 3  42.23 
 
 
254 aa  171  7.999999999999999e-42  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.91289 
 
 
-
 
NC_007406  Nwi_0553  HAD family hydrolase  48.77 
 
 
247 aa  168  7e-41  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1067  HAD family hydrolase  45.45 
 
 
249 aa  167  1e-40  Nitrobacter hamburgensis X14  Bacteria  normal  0.307396  n/a   
 
 
-
 
NC_007404  Tbd_0690  HAD family hydrolase  44.64 
 
 
253 aa  166  2.9999999999999998e-40  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.32351  normal  0.224311 
 
 
-
 
NC_013422  Hneap_0732  HAD-superfamily hydrolase, subfamily IA, variant 3  40.49 
 
 
252 aa  164  1.0000000000000001e-39  Halothiobacillus neapolitanus c2  Bacteria  normal  0.595583  n/a   
 
 
-
 
NC_008825  Mpe_A2785  haloacid dehalogenase  41.94 
 
 
267 aa  164  1.0000000000000001e-39  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0931  HAD-superfamily hydrolase, subfamily IA, variant 3  42.79 
 
 
253 aa  162  3e-39  Methylobacterium populi BJ001  Bacteria  normal  0.22053  normal  0.844847 
 
 
-
 
NC_007484  Noc_0880  HAD family hydrolase  47.55 
 
 
255 aa  161  1e-38  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3556  HAD family hydrolase  43.33 
 
 
262 aa  159  4e-38  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0853  HAD-superfamily hydrolase, subfamily IA, variant 3  41.04 
 
 
254 aa  157  1e-37  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5014  HAD-superfamily hydrolase, subfamily IA, variant 3  45.54 
 
 
248 aa  156  2e-37  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.652483  n/a   
 
 
-
 
NC_011729  PCC7424_5215  HAD-superfamily hydrolase, subfamily IA, variant 3  40.52 
 
 
248 aa  156  3e-37  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00121216 
 
 
-
 
NC_011894  Mnod_0323  HAD-superfamily hydrolase, subfamily IA, variant 3  49.75 
 
 
258 aa  155  4e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2280  HAD family hydrolase  47.81 
 
 
256 aa  154  2e-36  Methylobacterium sp. 4-46  Bacteria  normal  0.299074  normal  0.0109793 
 
 
-
 
NC_007614  Nmul_A0608  HAD family hydrolase  39.56 
 
 
259 aa  153  2.9999999999999998e-36  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.675821  n/a   
 
 
-
 
NC_008312  Tery_4648  HAD family hydrolase  36.73 
 
 
252 aa  152  4e-36  Trichodesmium erythraeum IMS101  Bacteria  normal  0.842677  normal  0.864231 
 
 
-
 
NC_007778  RPB_4341  HAD family hydrolase  44.44 
 
 
248 aa  151  1e-35  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0493927 
 
 
-
 
NC_013124  Afer_0609  HAD-superfamily hydrolase, subfamily IA, variant 3  44.16 
 
 
249 aa  150  2e-35  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.447765  n/a   
 
 
-
 
NC_007958  RPD_4237  HAD family hydrolase  44.44 
 
 
248 aa  150  2e-35  Rhodopseudomonas palustris BisB5  Bacteria  hitchhiker  0.00960992  normal  0.35717 
 
 
-
 
NC_009355  OSTLU_5695  predicted protein  39.42 
 
 
229 aa  149  4e-35  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  n/a   
 
 
-
 
NC_011757  Mchl_0953  HAD-superfamily hydrolase, subfamily IA, variant 3  39.15 
 
 
253 aa  148  7e-35  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0990  HAD family hydrolase  39.15 
 
 
253 aa  148  7e-35  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.480228 
 
 
-
 
NC_007520  Tcr_1242  HAD family hydrolase  38.83 
 
 
253 aa  148  1.0000000000000001e-34  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.496272  n/a   
 
 
-
 
NC_007604  Synpcc7942_1885  HAD family hydrolase  40.85 
 
 
255 aa  147  1.0000000000000001e-34  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3029  HAD-superfamily hydrolase, subfamily IA, variant 3  40.09 
 
 
267 aa  147  2.0000000000000003e-34  Variovorax paradoxus S110  Bacteria  normal  0.0148713  n/a   
 
 
-
 
NC_008781  Pnap_1980  HAD family hydrolase  47.03 
 
 
253 aa  147  2.0000000000000003e-34  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.294868  normal 
 
 
-
 
NC_007298  Daro_3629  HAD family hydrolase  43.84 
 
 
233 aa  146  3e-34  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.956312 
 
 
-
 
NC_011884  Cyan7425_3617  HAD-superfamily hydrolase, subfamily IA, variant 3  43.14 
 
 
256 aa  145  4.0000000000000006e-34  Cyanothece sp. PCC 7425  Bacteria  normal  0.675115  normal 
 
 
-
 
NC_007952  Bxe_B2478  HAD family hydrolase  40.49 
 
 
254 aa  144  1e-33  Burkholderia xenovorans LB400  Bacteria  normal  0.0642975  normal  0.83029 
 
 
-
 
NC_014213  Mesil_3262  hypothetical protein  40.56 
 
 
250 aa  142  4e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.343145 
 
 
-
 
NC_008819  NATL1_10371  putative CbbY-like protein  36.55 
 
 
248 aa  141  9e-33  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.549559  hitchhiker  0.0000687535 
 
 
-
 
NC_007335  PMN2A_0356  HAD family hydrolase  36.55 
 
 
248 aa  138  7.999999999999999e-32  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.138453  n/a   
 
 
-
 
NC_011678  PHATRDRAFT_12969  predicted protein  36.73 
 
 
244 aa  137  1e-31  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_007493  RSP_1279  CbbY family protein  40.2 
 
 
230 aa  136  3.0000000000000003e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.183021  n/a   
 
 
-
 
NC_009049  Rsph17029_2938  HAD family hydrolase  40.2 
 
 
230 aa  136  3.0000000000000003e-31  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009976  P9211_09091  putative CbbY-like protein  38.19 
 
 
249 aa  134  9.999999999999999e-31  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.642347  hitchhiker  0.000010947 
 
 
-
 
NC_009485  BBta_6394  haloacid dehalogenase-like hydrolase  43.38 
 
 
240 aa  133  1.9999999999999998e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.275881  normal 
 
 
-
 
NC_013161  Cyan8802_2025  HAD-superfamily hydrolase, subfamily IA, variant 3  37.33 
 
 
247 aa  133  1.9999999999999998e-30  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2000  HAD-superfamily hydrolase, subfamily IA, variant 3  37.33 
 
 
247 aa  133  1.9999999999999998e-30  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009428  Rsph17025_2709  HAD family hydrolase  40.2 
 
 
230 aa  133  3e-30  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.672792 
 
 
-
 
NC_009485  BBta_0457  putative haloacid dehalogenase-like hydrolase cbbY-like protein  39.17 
 
 
236 aa  132  3e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0760422 
 
 
-
 
NC_007577  PMT9312_0949  putative CbbY  32.34 
 
 
254 aa  130  2.0000000000000002e-29  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.283596  n/a   
 
 
-
 
NC_013739  Cwoe_3124  HAD-superfamily hydrolase, subfamily IA, variant 3  40.19 
 
 
254 aa  129  3e-29  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3317  HAD-superfamily hydrolase, subfamily IA, variant 3  38.7 
 
 
262 aa  129  3e-29  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000267703  hitchhiker  0.00944163 
 
 
-
 
NC_008816  A9601_10181  putative CbbY-like protein  31.84 
 
 
253 aa  129  6e-29  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1033  HAD-superfamily hydrolase, subfamily IA, variant 3  40.95 
 
 
260 aa  128  8.000000000000001e-29  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_10171  putative CbbY-like protein  31.98 
 
 
253 aa  126  4.0000000000000003e-28  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.606492  n/a   
 
 
-
 
NC_007513  Syncc9902_1156  HAD family hydrolase  37.81 
 
 
251 aa  125  5e-28  Synechococcus sp. CC9902  Bacteria  normal  0.10504  n/a   
 
 
-
 
NC_007516  Syncc9605_1319  HAD family hydrolase  43.07 
 
 
259 aa  121  9.999999999999999e-27  Synechococcus sp. CC9605  Bacteria  normal  normal  0.0765605 
 
 
-
 
NC_008817  P9515_09281  putative CbbY-like protein  30.69 
 
 
249 aa  118  7.999999999999999e-26  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0079  HAD-superfamily hydrolase, subfamily IA, variant 3  37.33 
 
 
248 aa  115  6e-25  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_14541  putative CbbY-like protein  40.1 
 
 
252 aa  115  6e-25  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_009369  OSTLU_27888  predicted protein  33.95 
 
 
297 aa  102  8e-21  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.0126093  normal  0.151084 
 
 
-
 
NC_011679  PHATR_13261  predicted protein  32.23 
 
 
238 aa  86.3  5e-16  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.684824  n/a   
 
 
-
 
NC_014150  Bmur_0058  HAD-superfamily hydrolase, subfamily IA, variant 3  25.13 
 
 
203 aa  85.9  6e-16  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.00166064  n/a   
 
 
-
 
NC_014230  CA2559_12643  Predicted phosphatase  27.93 
 
 
216 aa  82  0.000000000000007  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.128583  n/a   
 
 
-
 
NC_011661  Dtur_0461  HAD-superfamily hydrolase, subfamily IA, variant 3  28.21 
 
 
217 aa  82  0.000000000000008  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1749  HAD family hydrolase  30.4 
 
 
227 aa  79.3  0.00000000000005  Pelobacter propionicus DSM 2379  Bacteria  normal  0.109928  n/a   
 
 
-
 
NC_013171  Apre_1545  HAD-superfamily hydrolase, subfamily IA, variant 3  27.35 
 
 
213 aa  78.6  0.00000000000009  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1359  hydrolase  30.96 
 
 
255 aa  78.6  0.00000000000009  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0172226  normal 
 
 
-
 
NC_008146  Mmcs_1057  haloacid dehalogenase-like hydrolase  30.46 
 
 
266 aa  77.4  0.0000000000002  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1073  hydrolase  30.46 
 
 
266 aa  77.4  0.0000000000002  Mycobacterium sp. KMS  Bacteria  normal  0.48254  normal  0.11925 
 
 
-
 
NC_011071  Smal_0452  HAD-superfamily hydrolase, subfamily IA, variant 3  33.5 
 
 
227 aa  77  0.0000000000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011892  Mnod_8721  HAD-superfamily hydrolase, subfamily IA, variant 3  32.46 
 
 
242 aa  75.9  0.0000000000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.966182  n/a   
 
 
-
 
NC_004578  PSPTO_3590  HAD-superfamily hydrolase  32.35 
 
 
218 aa  75.5  0.0000000000007  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.906124  n/a   
 
 
-
 
NC_005945  BAS4107  HAD superfamily hydrolase  29.22 
 
 
221 aa  75.5  0.0000000000008  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4427  HAD superfamily hydrolase  29.22 
 
 
221 aa  75.5  0.0000000000008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1084  hydrolase  29.95 
 
 
266 aa  75.5  0.0000000000008  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7385  HAD-superfamily hydrolase, subfamily IA  32.26 
 
 
248 aa  74.7  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0037  haloacid dehalogenase/epoxide hydrolase family protein  31.68 
 
 
219 aa  75.1  0.000000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3945  HAD superfamily hydrolase  28.77 
 
 
221 aa  74.3  0.000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05174  phosphoglycolate phosphatase  31.68 
 
 
256 aa  74.3  0.000000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009338  Mflv_5013  hydrolase  28.91 
 
 
255 aa  73.2  0.000000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.376254  normal  0.29251 
 
 
-
 
NC_010501  PputW619_2424  HAD family hydrolase  33.5 
 
 
221 aa  72.4  0.000000000006  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1516  HAD-superfamily hydrolase, subfamily IA, variant 3  30.73 
 
 
227 aa  72.4  0.000000000007  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3082  HAD-superfamily hydrolase, subfamily IA, variant 3  30.19 
 
 
224 aa  72  0.000000000008  Geobacter bemidjiensis Bem  Bacteria  normal  0.48861  n/a   
 
 
-
 
NC_007947  Mfla_1729  HAD family hydrolase  29.08 
 
 
728 aa  72  0.000000000008  Methylobacillus flagellatus KT  Bacteria  normal  0.696153  hitchhiker  0.000289006 
 
 
-
 
NC_011369  Rleg2_0846  HAD-superfamily hydrolase, subfamily IA, variant 3  30.05 
 
 
231 aa  72  0.000000000008  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.814852 
 
 
-
 
NC_011773  BCAH820_4222  hydrolase, haloacid dehalogenase-like family  28.44 
 
 
220 aa  71.6  0.00000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_004347  SO_0431  2-deoxyglucose-6-phosphatase  27.45 
 
 
217 aa  71.2  0.00000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_4047  2-deoxyglucose-6-phosphatase  27.94 
 
 
219 aa  71.6  0.00000000001  Shewanella baltica OS195  Bacteria  hitchhiker  0.0000965281  normal  0.234971 
 
 
-
 
NC_006274  BCZK3956  HAD superfamily hydrolase  28.44 
 
 
220 aa  70.5  0.00000000002  Bacillus cereus E33L  Bacteria  normal  0.945579  n/a   
 
 
-
 
NC_007802  Jann_1064  haloacid dehalogenase-like hydrolase  30.59 
 
 
225 aa  70.9  0.00000000002  Jannaschia sp. CCS1  Bacteria  normal  0.0114019  normal 
 
 
-
 
NC_010814  Glov_1614  HAD-superfamily hydrolase, subfamily IA, variant 3  28.23 
 
 
224 aa  70.9  0.00000000002  Geobacter lovleyi SZ  Bacteria  normal  0.0147527  n/a   
 
 
-
 
NC_013517  Sterm_2266  HAD-superfamily hydrolase, subfamily IA, variant 3  24.29 
 
 
220 aa  70.5  0.00000000002  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1356  HAD family hydrolase  25.63 
 
 
221 aa  70.9  0.00000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.14421  n/a   
 
 
-
 
NC_011146  Gbem_1871  HAD-superfamily hydrolase, subfamily IA, variant 3  33.01 
 
 
227 aa  70.5  0.00000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0141  beta-phosphoglucomutase  26.6 
 
 
214 aa  70.5  0.00000000003  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1743  HAD-superfamily hydrolase, subfamily IA, variant 3  25.82 
 
 
227 aa  70.1  0.00000000003  Geobacillus sp. WCH70  Bacteria  normal  0.293469  n/a   
 
 
-
 
NC_007413  Ava_3074  HAD family hydrolase  30.54 
 
 
222 aa  69.7  0.00000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_03084  HAD superfamily hydrolase  32.7 
 
 
226 aa  70.1  0.00000000004  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3410  2-deoxyglucose-6-phosphatase  26.44 
 
 
217 aa  69.7  0.00000000005  Shewanella putrefaciens CN-32  Bacteria  normal  0.0110715  n/a   
 
 
-
 
NC_013457  VEA_001299  CbbY family protein  32.18 
 
 
216 aa  69.7  0.00000000005  Vibrio sp. Ex25  Bacteria  normal  0.916657  n/a   
 
 
-
 
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