Gene Tery_4648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4648 
Symbol 
ID4246302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp7147493 
End bp7148251 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content33% 
IMG OID638109515 
ProductHAD family hydrolase 
Protein accessionYP_724091 
Protein GI113478030 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.842677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.864231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAC AGTTTACCCT AATATTTGAT GTTGATGGCA CAATAGCCGA TACAGAAAGA 
GATGGCCATA GAGTAGCTTT TAATCAAGCT TTTGCTGAAG CAGGTTTAGA TTGGGAATGG
TCAGTTTCCT TATATGGAGA ATTACTGGCG ATCTCTGGTG GCAAAGAACG AATTAACTTT
TATATTAGTC AGTATAAACC AAAGCTTAAA TCGTCAATTC CACTGCTAGA ATTGATTTCT
AATCTACACT CAAGTAAAAC AAATTATTAC CGAAAATTAT TAAGTACAGG TGCTATACCA
TTACGGCCAG GAATAAAAAG ATTATTAACA GAGGCACGAA ATAATAAAAT GCGTTTAGCG
ATCGCTACTA CTAGTACTAT TACAAATGTG ACAGCATTAT TAGAGAATAC CTTGGGAAAA
GAAAGTATTT CTTGGTTTGA AATAATTGCG GCAGGGGATA TAGTTCCGGC TAAGAAACCT
GCACCAGATA TTTACTATTA TGTATTAGAA AAAATGAATA TTCAAAGCAA TAATTGTATA
GTATTTGAAG ATTCACACCA TGGTTTACAA GCTGCTTTGC AAACAGGATT AAAAACAATT
GTAACTGTTA ATAATTATAC TATTAATCAA AATTTTACTG GCGCAACTCT AGTATTAAAT
CATTTAGGAG AACCAGAAAA ACCATTTACT ATTTTGGCTG GAAATGCTCT AGGTAGAAAT
TATTGCGATC TAAAGTTAAT AGAGCTTCTC CAAGATTGA
 
Protein sequence
MIEQFTLIFD VDGTIADTER DGHRVAFNQA FAEAGLDWEW SVSLYGELLA ISGGKERINF 
YISQYKPKLK SSIPLLELIS NLHSSKTNYY RKLLSTGAIP LRPGIKRLLT EARNNKMRLA
IATTSTITNV TALLENTLGK ESISWFEIIA AGDIVPAKKP APDIYYYVLE KMNIQSNNCI
VFEDSHHGLQ AALQTGLKTI VTVNNYTINQ NFTGATLVLN HLGEPEKPFT ILAGNALGRN
YCDLKLIELL QD