| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0690 |
|---|
| Symbol | |
|---|
| ID | 3672658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 730430 |
|---|
| End bp | 731191 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637709365 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_314448 |
|---|
| Protein GI | 74316708 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.32351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.224311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATTAC GCGCCCTATT ATTCGACGTG GACGGCACCC TTGCCGATAC CGAACGGGAC
GGCCACCGGC CGGCCTTCAA TCAAGCCTTC GCCGACGCCG GACTCGACTG GCAGTGGGAC
GTGGATCTGT ACGGCAAACT GCTCGCCGTC ACCGGCGGAA AAGAGCGGAT GAAACACTAC
ATCGAAGCCT TCCGCCCCGA CTATCGGCGG CCGGACAATT TCGACGAAAT GGTCGCGAAA
CTGCATCAGG CCAAAACACG TATCTACGCC GACCTCGCCG CTCGTGGTGG TATTCCCATG
CGCCCCGGCG TCCGGCGCCT GCTCGAGGAG GCGCGCGCCG CAGGCCTGCG CCTTGCGATC
GCGACGACGA CGACGCCGGA AAACGTCACC GTTCTGCTCG AACACAGCCT CGGCCCGGGC
ACCCAGGAGT GGTTCGAGGT GATCGCCGCC GGCGACGTCG TCCCCGCGAA GAAGCCCGCC
CCCGACATCT ATCACTACGC GTTGGAGGCG ATGGGGCTTG CGGCCGCGGA CTGCCTCGCG
TTCGAGGACT CGGAGAACGG CCTGCGCGCG AGCCTCGGCG CCGGACTCAA AACCCTCGTG
ACGGTCAACG ACTACACGCT CGACCACGAT TTCAGCGGCG CGGCCGCCGT GCTCTCCGAT
CTCGGCGAGC CCGAGGCCCC GGCGCGCCGC CTGACCGGCC CCGCCCTCCC CGGCCCCTGC
GTCGACGTCG CCTATCTCAA AACGCTGCAT CGCAGCCAGT GA
|
|---|
| Protein sequence | MTLRALLFDV DGTLADTERD GHRPAFNQAF ADAGLDWQWD VDLYGKLLAV TGGKERMKHY
IEAFRPDYRR PDNFDEMVAK LHQAKTRIYA DLAARGGIPM RPGVRRLLEE ARAAGLRLAI
ATTTTPENVT VLLEHSLGPG TQEWFEVIAA GDVVPAKKPA PDIYHYALEA MGLAAADCLA
FEDSENGLRA SLGAGLKTLV TVNDYTLDHD FSGAAAVLSD LGEPEAPARR LTGPALPGPC
VDVAYLKTLH RSQ
|
|---|
| |