| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1348 |
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| Symbol | |
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| ID | 3738488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1508061 |
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| End bp | 1508741 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637778628 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_384307 |
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| Protein GI | 78222560 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.523514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000000193697 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCTTTCCG CAGTCATTTT CGATTTCGAC GGCATCATCG TCGATACCGA GCCGCTCCAT
TACCGGGCTT TCCAGGCTAT TCTCGAGCCC CTGGGGCTCG GTTATGCCTG GGAGGAGTAT
GTGAATCTCT ATATGGGGTT TGACGATCGC GATGCCTTCC GCGAGGCGTT CAGGGTGCAC
GGCAGGACCC TGAACGACCA TGAACTGGAA CTGCTCATCG ACCGCAAGGC CGCGGCGTTC
CAGGAGATCA TCTCCAGTGG CGTTGCTCCC TATCCGGGAG TTGTCGAACT CATCCGATCC
ATCAACGGTA CCTTCCCGTT GGCGCTTTGC AGCGGCGCCC TCAGGTGCGA CATCCTCCCC
ATACTGGCGG GCCTCGGCCT GTCCAACGCC TTTGACGTGA TGGTCACCGC CGAAGAGGTG
ACTGCCAGCA AGCCCGATCC CGCCAGCTAC GCCCTTGCCG TGGAGCGGCT CGCCGCTGCC
TTCGTCGACC GGGGGATTCT CCCCGGCCGC TGCATCGCCA TCGAAGACAC TCCCGCCGGC
ATCGCCTCCG CCACCGGCGC CGGCATTCCC GTCATCGCCG TCACCAACAG CTATCCCGCC
GAGATGCTCA GCGGCGCCGT CAGGGTGGTT GACTCACTTG CGGGGCTTGC TCTTGCGGAC
ATCGAGAACC TGGCGAGATA G
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| Protein sequence | MLSAVIFDFD GIIVDTEPLH YRAFQAILEP LGLGYAWEEY VNLYMGFDDR DAFREAFRVH
GRTLNDHELE LLIDRKAAAF QEIISSGVAP YPGVVELIRS INGTFPLALC SGALRCDILP
ILAGLGLSNA FDVMVTAEEV TASKPDPASY ALAVERLAAA FVDRGILPGR CIAIEDTPAG
IASATGAGIP VIAVTNSYPA EMLSGAVRVV DSLAGLALAD IENLAR
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