| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1980 |
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| Symbol | |
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| ID | 4688088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2102443 |
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| End bp | 2103204 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639834988 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_982210 |
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| Protein GI | 121604881 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.294868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCA GCGAACTGCA AGCCCTGATT TTTGATGTCG ATGGCACCCT GGCCGACACC
GAAAGCGCGC ACCGCGCGGC GTTCAACCAG GCTTTTTCCG CCATGGGGCT GGACTGGTTC
TGGGACGAGG CGCTGTACAC CCGGCTGCTC GACATCTCGG GCGGCAAGGA GCGCATGCTG
CACCACTGGC GCCAGGTCCA GCCGGACCTG CAGGACATCG GCGGCGCCGG CGTGCGCGAC
ACCATCGCCC GTCTGCATGA ATTCAAGACC GCCGCCTATG AAAGCGCGGT GCAGGACGGC
GCCGTGCAGC TGCGCCCCGG CGTGCTGCGG CTGATCGAAG CGGCCAGCCA GGCCAGGCTG
CGCCTGGCGA TTGCCACCAC GACCTCGCCG GTCAACATCG CCGCGCTGCT GCGCAAGGCC
ATCGGCCCGG ACTGGAAGCA GTATTTCATG GTGGTCGAGG ACGCCTCGAC CGCGCCGCTC
AAGAAACCGC ATCCGCAGGT CTATCTGCAA ACCCTGGCGC GGCTGCAGTT GCCGGCCGCC
AGCTGCCTGG CTTTCGAGGA CTCGTCCAAC GGGCTGAGGG CAGCCCTGGC GGCCGGGCTG
GCCACGCTGG TCACGCCCAA CGGCTTCACC GCCCACCACG ACTTCACCGG CGCGCTGCGC
ATCCTGCCCA CGCTGCAAGG CGTGACGCTT GCGCACCTGC ACGCCTGGCA TGCCGAGGCG
CCGGCCTGGC GCCTTGCTTC TTCCCTGTTT TCGTCCGACT GA
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| Protein sequence | MPASELQALI FDVDGTLADT ESAHRAAFNQ AFSAMGLDWF WDEALYTRLL DISGGKERML
HHWRQVQPDL QDIGGAGVRD TIARLHEFKT AAYESAVQDG AVQLRPGVLR LIEAASQARL
RLAIATTTSP VNIAALLRKA IGPDWKQYFM VVEDASTAPL KKPHPQVYLQ TLARLQLPAA
SCLAFEDSSN GLRAALAAGL ATLVTPNGFT AHHDFTGALR ILPTLQGVTL AHLHAWHAEA
PAWRLASSLF SSD
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