Gene NATL1_10371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_10371 
Symbol 
ID4780610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp955387 
End bp956133 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content34% 
IMG OID640084316 
Productputative CbbY-like protein 
Protein accessionYP_001014860 
Protein GI124025744 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.549559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000687535 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATAAAT TAAAAGCAGT CTTTTGGGAT GTGGATGGAA CAATTGCCGA TACAGAATTG 
TGTGGGCATA GAGTCGCTTT TAATTTGGCC TTTAAGGATT TTGATTTGGA TTGGAACTGG
AATGAGAGCC AATATTTGGA TCTTCTAAAA ATATCGGGAG GTTTTAACCG CATAATCCAC
TATCGAAACA AAATCGATAG TGACATTACT GAAAGCAAAT GTTCCGAGAT TCAAGCCAGG
AAGCGTATTC ATTACAAGAA ATTAATTCAA TCTGGCAAAA TTAAAGTAAG AGAGGGAGTC
CTGAGGCTTA TTAATGAACT TCATAACTCT GATATAGAAC AATTTATTGT TACGACCAGT
GGAAAAGATT CTCTTGATCC TTTTCTAAAA ACCTCATTGA GTTCACATTT AAATTATTTT
TCCGGATTTA TTACATATGA AGATGTAAGC AGGCACAAGC CCTTCCCTGA TGCATATAAG
CTAGCGCTTA AATTAAGTAA GCAATCACAA TTTAATTGCA TAGCTATTGA GGACTCTAAG
ATTGGCGTTG AATCTGCTAA GGCAGCTAAT CTTAATTGCC TTTTGATTTT GCCTCCGTGG
AATAGTTCTA AGCAAAATAT TTCTAAAAAA GCTAATGCAT GTTTAAATAG CCTTGGTAAT
TTTGATAATC CATCTAGGCT AATTTATGGT AAAAAGCTAA TTAGTGATCA TGTGGATTTT
GATTATTTGA CAAATATTAT AAATTAA
 
Protein sequence
MHKLKAVFWD VDGTIADTEL CGHRVAFNLA FKDFDLDWNW NESQYLDLLK ISGGFNRIIH 
YRNKIDSDIT ESKCSEIQAR KRIHYKKLIQ SGKIKVREGV LRLINELHNS DIEQFIVTTS
GKDSLDPFLK TSLSSHLNYF SGFITYEDVS RHKPFPDAYK LALKLSKQSQ FNCIAIEDSK
IGVESAKAAN LNCLLILPPW NSSKQNISKK ANACLNSLGN FDNPSRLIYG KKLISDHVDF
DYLTNIIN