More than 300 homologs were found in PanDaTox collection
for query gene Amir_2536 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_2536  short-chain dehydrogenase/reductase SDR  100 
 
 
262 aa  494  1e-139  Actinosynnema mirum DSM 43827  Bacteria  normal  0.439983  n/a   
 
 
-
 
NC_009338  Mflv_4603  short-chain dehydrogenase/reductase SDR  43.46 
 
 
268 aa  159  6e-38  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_1156  short-chain dehydrogenase/reductase SDR  37.82 
 
 
280 aa  121  9e-27  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.434492  n/a   
 
 
-
 
NC_011313  VSAL_II0263  putative short chain dehydrogenase  28.31 
 
 
278 aa  110  2.0000000000000002e-23  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.390771  n/a   
 
 
-
 
NC_011060  Ppha_1918  short-chain dehydrogenase/reductase SDR  36.46 
 
 
280 aa  108  1e-22  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.000963224  n/a   
 
 
-
 
NC_013595  Sros_6830  oxidoreductase  37.31 
 
 
265 aa  102  4e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.356358 
 
 
-
 
NC_013172  Bfae_30720  transcriptional regulator  43.48 
 
 
293 aa  102  6e-21  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3722  short-chain dehydrogenase/reductase SDR  34.6 
 
 
267 aa  102  7e-21  Thermomonospora curvata DSM 43183  Bacteria  normal  0.848764  n/a   
 
 
-
 
NC_013510  Tcur_1562  short-chain dehydrogenase/reductase SDR  41.36 
 
 
275 aa  101  9e-21  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0498761  n/a   
 
 
-
 
NC_013757  Gobs_0783  short-chain dehydrogenase/reductase SDR  37.5 
 
 
298 aa  101  1e-20  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_2306  short-chain dehydrogenase/reductase SDR  30.16 
 
 
273 aa  98.6  9e-20  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.000000218098  normal  0.0212741 
 
 
-
 
NC_008699  Noca_3699  short-chain dehydrogenase/reductase SDR  37.89 
 
 
280 aa  97.8  1e-19  Nocardioides sp. JS614  Bacteria  normal  0.0817481  n/a   
 
 
-
 
NC_008699  Noca_3816  short-chain dehydrogenase/reductase SDR  41.59 
 
 
228 aa  97.4  2e-19  Nocardioides sp. JS614  Bacteria  normal  0.227538  n/a   
 
 
-
 
NC_010718  Nther_2430  short-chain dehydrogenase/reductase SDR  31.22 
 
 
285 aa  96.7  3e-19  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  29.13 
 
 
264 aa  96.7  4e-19  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  29.48 
 
 
264 aa  95.5  8e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  36.9 
 
 
279 aa  95.1  9e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_013441  Gbro_1603  short-chain dehydrogenase/reductase SDR  35.04 
 
 
277 aa  94.7  1e-18  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  29.08 
 
 
264 aa  95.1  1e-18  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  29.08 
 
 
264 aa  95.1  1e-18  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  29.08 
 
 
264 aa  95.1  1e-18  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  28.74 
 
 
264 aa  95.1  1e-18  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  29.08 
 
 
264 aa  94  2e-18  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  29.08 
 
 
264 aa  94.4  2e-18  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_008825  Mpe_A0884  dehydrogenase  39.47 
 
 
257 aa  94  2e-18  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2457  short-chain dehydrogenase/reductase SDR  35.59 
 
 
291 aa  93.2  4e-18  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0300911  n/a   
 
 
-
 
NC_009921  Franean1_0417  short-chain dehydrogenase/reductase SDR  37.72 
 
 
247 aa  92.8  4e-18  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  29.08 
 
 
264 aa  92.8  5e-18  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  29.88 
 
 
264 aa  92.8  5e-18  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7224  short-chain dehydrogenase/reductase SDR  36.56 
 
 
263 aa  92.8  6e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.542402  normal  0.392428 
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  29.08 
 
 
264 aa  92.4  7e-18  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_013501  Rmar_1462  short-chain dehydrogenase/reductase SDR  34.84 
 
 
266 aa  92  8e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2681  short chain dehydrogenase family protein  25.45 
 
 
273 aa  91.7  1e-17  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00380586  n/a   
 
 
-
 
NC_007760  Adeh_2306  short-chain dehydrogenase/reductase SDR  35.12 
 
 
286 aa  91.7  1e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.930868  n/a   
 
 
-
 
NC_013743  Htur_0514  short-chain dehydrogenase/reductase SDR  36.68 
 
 
252 aa  92  1e-17  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_014158  Tpau_0045  short-chain dehydrogenase/reductase SDR  35.98 
 
 
297 aa  91.7  1e-17  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2719  short chain dehydrogenase family protein  23.77 
 
 
273 aa  90.9  2e-17  Bacillus cereus AH187  Bacteria  normal  0.272681  n/a   
 
 
-
 
NC_009943  Dole_1249  short-chain dehydrogenase/reductase SDR  33.46 
 
 
273 aa  90.5  2e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0626824  n/a   
 
 
-
 
NC_013739  Cwoe_5919  short-chain dehydrogenase/reductase SDR  32.08 
 
 
295 aa  90.5  2e-17  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3370  short-chain dehydrogenase/reductase SDR  34.19 
 
 
285 aa  91.3  2e-17  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.976299 
 
 
-
 
NC_008726  Mvan_3101  short-chain dehydrogenase/reductase SDR  33.58 
 
 
280 aa  89.7  4e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.300242  normal  0.231356 
 
 
-
 
NC_009338  Mflv_2070  short-chain dehydrogenase/reductase SDR  33.05 
 
 
275 aa  89.4  5e-17  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0241632 
 
 
-
 
NC_008148  Rxyl_3000  short-chain dehydrogenase/reductase SDR  36.12 
 
 
241 aa  89.4  5e-17  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2317  short-chain dehydrogenase/reductase SDR  39.15 
 
 
263 aa  89.4  6e-17  Thermobispora bispora DSM 43833  Bacteria  normal  0.49068  normal  0.325129 
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  32.26 
 
 
258 aa  88.6  8e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1324  D-beta-hydroxybutyrate dehydrogenase  35.68 
 
 
260 aa  89  8e-17  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2447  short-chain dehydrogenase/reductase SDR  38.12 
 
 
264 aa  88.6  1e-16  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.115187 
 
 
-
 
NC_007953  Bxe_C0635  putative short-chain dehydrogenase/reductase  34.63 
 
 
246 aa  88.2  1e-16  Burkholderia xenovorans LB400  Bacteria  normal  0.660542  normal  0.0297002 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  32.4 
 
 
266 aa  87.8  1e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_010831  Cphamn1_0180  3-oxoacyl-(acyl-carrier-protein) reductase  32.88 
 
 
245 aa  87  2e-16  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  0.00307059  normal 
 
 
-
 
NC_009484  Acry_2115  hypothetical protein  35.71 
 
 
292 aa  87.4  2e-16  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1565  short-chain dehydrogenase/reductase SDR  32.64 
 
 
286 aa  87.4  2e-16  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009427  Saro_3619  short-chain dehydrogenase/reductase SDR  33.5 
 
 
289 aa  87.4  2e-16  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_3541  short-chain dehydrogenase/reductase SDR  35.75 
 
 
245 aa  87.4  2e-16  Paracoccus denitrificans PD1222  Bacteria  normal  0.0724281  normal  0.787081 
 
 
-
 
NC_008699  Noca_3561  short chain dehydrogenase  34.58 
 
 
276 aa  87.4  2e-16  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11893  short chain dehydrogenase  32.61 
 
 
286 aa  86.7  3e-16  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.361469 
 
 
-
 
NC_012793  GWCH70_2271  short-chain dehydrogenase/reductase SDR  29.37 
 
 
262 aa  87  3e-16  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  37.57 
 
 
271 aa  86.3  4e-16  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6390  short-chain dehydrogenase/reductase SDR  35.59 
 
 
253 aa  86.7  4e-16  Frankia sp. EAN1pec  Bacteria  normal  0.561861  normal  0.0707299 
 
 
-
 
NC_011891  A2cp1_1643  short-chain dehydrogenase/reductase SDR  33.06 
 
 
286 aa  86.7  4e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009427  Saro_3768  short-chain dehydrogenase/reductase SDR  35.19 
 
 
256 aa  85.9  5e-16  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0560932  n/a   
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  33.86 
 
 
266 aa  85.9  6e-16  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2356  short-chain dehydrogenase/reductase SDR  37.76 
 
 
282 aa  85.9  7e-16  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0998128  n/a   
 
 
-
 
NC_013441  Gbro_1880  short-chain dehydrogenase/reductase SDR  29.86 
 
 
276 aa  85.5  7e-16  Gordonia bronchialis DSM 43247  Bacteria  normal  0.138576  n/a   
 
 
-
 
NC_007493  RSP_2857  D-beta-hydroxybutyrate dehydrogenase  31.98 
 
 
265 aa  84.7  0.000000000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.520091  n/a   
 
 
-
 
NC_007511  Bcep18194_B1514  Short-chain dehydrogenase/reductase SDR  33.33 
 
 
252 aa  84.7  0.000000000000001  Burkholderia sp. 383  Bacteria  normal  0.411347  normal  0.744647 
 
 
-
 
NC_008726  Mvan_4479  short-chain dehydrogenase/reductase SDR  33.51 
 
 
276 aa  85.1  0.000000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0643496  normal  0.318534 
 
 
-
 
NC_008148  Rxyl_0346  short-chain dehydrogenase/reductase SDR  35.06 
 
 
256 aa  85.1  0.000000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0244456  n/a   
 
 
-
 
NC_008686  Pden_2377  short-chain dehydrogenase/reductase SDR  37.67 
 
 
249 aa  84.7  0.000000000000001  Paracoccus denitrificans PD1222  Bacteria  normal  0.496864  normal  0.812615 
 
 
-
 
NC_007512  Plut_0131  3-oxoacyl-(acyl-carrier-protein) reductase  33.63 
 
 
245 aa  84.7  0.000000000000002  Chlorobium luteolum DSM 273  Bacteria  normal  0.120855  normal 
 
 
-
 
NC_009049  Rsph17029_1436  3-hydroxybutyrate dehydrogenase  31.47 
 
 
257 aa  84.3  0.000000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  hitchhiker  0.00798692 
 
 
-
 
NC_007794  Saro_1875  short-chain dehydrogenase/reductase SDR  42.16 
 
 
280 aa  84  0.000000000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.370364  n/a   
 
 
-
 
NC_009485  BBta_4672  putative 3-oxoacyl-(acyl-carrier-protein) reductase  34.84 
 
 
253 aa  84  0.000000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.572467  normal 
 
 
-
 
NC_011365  Gdia_0818  short-chain dehydrogenase/reductase SDR  34.53 
 
 
252 aa  83.6  0.000000000000003  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.100065 
 
 
-
 
NC_011060  Ppha_0197  3-oxoacyl-(acyl-carrier-protein) reductase  35.4 
 
 
245 aa  83.6  0.000000000000003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0167  3-oxoacyl-(acyl-carrier-protein) reductase  37.19 
 
 
245 aa  83.6  0.000000000000003  Chlorobium limicola DSM 245  Bacteria  normal  0.619009  n/a   
 
 
-
 
NC_008146  Mmcs_4117  short-chain dehydrogenase/reductase SDR  37.1 
 
 
274 aa  83.6  0.000000000000003  Mycobacterium sp. MCS  Bacteria  normal  0.0106138  n/a   
 
 
-
 
NC_013525  Tter_0268  short-chain dehydrogenase/reductase SDR  31.18 
 
 
250 aa  83.6  0.000000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008705  Mkms_4192  short-chain dehydrogenase/reductase SDR  37.1 
 
 
274 aa  83.6  0.000000000000003  Mycobacterium sp. KMS  Bacteria  normal  0.879856  normal 
 
 
-
 
NC_009565  TBFG_11271  short-chain type dehydrogenase/reductase  32.45 
 
 
276 aa  83.2  0.000000000000004  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000317139  hitchhiker  0.0033897 
 
 
-
 
NC_009077  Mjls_3989  short-chain dehydrogenase/reductase SDR  31.56 
 
 
276 aa  83.2  0.000000000000004  Mycobacterium sp. JLS  Bacteria  normal  0.171067  normal  0.181158 
 
 
-
 
NC_007908  Rfer_0320  short chain dehydrogenase  36.02 
 
 
267 aa  83.2  0.000000000000004  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_009338  Mflv_2216  short-chain dehydrogenase/reductase SDR  32.98 
 
 
276 aa  83.2  0.000000000000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.742045 
 
 
-
 
NC_008146  Mmcs_3975  short-chain dehydrogenase/reductase SDR  31.56 
 
 
276 aa  83.2  0.000000000000004  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2343  3-hydroxybutyrate dehydrogenase  36.7 
 
 
262 aa  83.2  0.000000000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0175  3-oxoacyl-(acyl-carrier-protein) reductase  33 
 
 
247 aa  83.2  0.000000000000004  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_4049  short-chain dehydrogenase/reductase SDR  31.56 
 
 
276 aa  83.2  0.000000000000004  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  32.81 
 
 
262 aa  82.8  0.000000000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  33.19 
 
 
267 aa  82.8  0.000000000000005  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_5413  short-chain dehydrogenase/reductase SDR  38.22 
 
 
308 aa  82.8  0.000000000000005  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3510  short-chain dehydrogenase/reductase SDR  36.63 
 
 
251 aa  82.8  0.000000000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.439576 
 
 
-
 
NC_009077  Mjls_4348  short-chain dehydrogenase/reductase SDR  37.1 
 
 
274 aa  82.4  0.000000000000006  Mycobacterium sp. JLS  Bacteria  normal  normal  0.201544 
 
 
-
 
NC_013172  Bfae_04660  2-hydroxycyclohexane-1-carbonyl-CoA dehydrogenase  38.62 
 
 
261 aa  82.4  0.000000000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0217  short chain dehydrogenase  28.45 
 
 
286 aa  82.4  0.000000000000007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.743608  normal 
 
 
-
 
NC_010552  BamMC406_3569  short-chain dehydrogenase/reductase SDR  38.22 
 
 
308 aa  82.4  0.000000000000007  Burkholderia ambifaria MC40-6  Bacteria  normal  0.683076  hitchhiker  0.00146118 
 
 
-
 
NC_008752  Aave_2868  hypothetical protein  36.51 
 
 
301 aa  82.4  0.000000000000008  Acidovorax citrulli AAC00-1  Bacteria  normal  0.596125  normal 
 
 
-
 
NC_008740  Maqu_0158  short-chain dehydrogenase/reductase SDR  30.21 
 
 
271 aa  81.6  0.00000000000001  Marinobacter aquaeolei VT8  Bacteria  normal  0.722445  n/a   
 
 
-
 
NC_013922  Nmag_2910  short-chain dehydrogenase/reductase SDR  35.65 
 
 
251 aa  81.6  0.00000000000001  Natrialba magadii ATCC 43099  Archaea  normal  0.640216  n/a   
 
 
-
 
NC_010338  Caul_0159  short-chain dehydrogenase/reductase SDR  32.33 
 
 
249 aa  82  0.00000000000001  Caulobacter sp. K31  Bacteria  normal  0.410897  normal  0.168063 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  35.91 
 
 
258 aa  81.6  0.00000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
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