| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1249 |
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| Symbol | |
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| ID | 5694084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1493399 |
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| End bp | 1494220 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641263843 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001529132 |
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| Protein GI | 158521262 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0626824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGT TCACCGATAA AGTCTTTATT GTAACCGGCG GGGCGTCCGG CATGGGCCGG
GCCGTTTGTG AACTTCTGGG GACGCGCGGC GCCATATTGA TTATTGCCGA TATTGACGGA
GAAAGCGCTG AAAAGGTGGC GGCCGGCATT ACGGCTGCGG GCGGCCGAGC CACGGGCGTG
TTCCTGGACA CCACGGCGGA TGAAACGGTC AGGCGGCTGG TGGATGAAAC AGCCGCCGAG
TACGGCCGGC TGGACTACAT GTTCAACAAC GCCGGTATCC TGATCGCCGG GGAAGTGAGA
GACATGAGCG ACGACCATTG GGCCCGCATC CTGGATGTCA ATTTCCGGGG CGTTCTCACC
GGTACGCTGG CAGCCTACCG GATAATGGTT GAACAGGGTT TTGGCCACAT CATCAACACG
GCCTCCACGG CCGGGCTGGT TCCCATTCCG GTGATCACGG CATATGCCAC TACCAAACAC
GCCGTGGTGG GTCTTTCAAT ATCCCTGCGG CCGGAGGCGG CCAAAGCGGG GGTCCGGGTC
AGCGTGGTCT GCCCGGGATA TGTGAGTACA TCCATTTTTG ACAAGGGGAC CGTGGTCAAA
GGGGATATGG CCGGACTGCT GTCGACCATG CCCATAAAAC CCATAAGCCC GGAAAAGGCG
GCCGGATATA TTGTCCGGGG TGTCGCGGCC AACCGGGGCG TCATTGTTTT TCCCTTCCAT
GCACGATTCC TCTGGGCACT GTATCGCATG TGCCCGGCCT TTTTCGGCTG GGGGTCCCGG
AAGGTGGTGG ACGACTTTCG GAAAATCAGG GACCGGCAAT AA
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| Protein sequence | MNLFTDKVFI VTGGASGMGR AVCELLGTRG AILIIADIDG ESAEKVAAGI TAAGGRATGV
FLDTTADETV RRLVDETAAE YGRLDYMFNN AGILIAGEVR DMSDDHWARI LDVNFRGVLT
GTLAAYRIMV EQGFGHIINT ASTAGLVPIP VITAYATTKH AVVGLSISLR PEAAKAGVRV
SVVCPGYVST SIFDKGTVVK GDMAGLLSTM PIKPISPEKA AGYIVRGVAA NRGVIVFPFH
ARFLWALYRM CPAFFGWGSR KVVDDFRKIR DRQ
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