| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0635 |
|---|
| Symbol | |
|---|
| ID | 4010149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | + |
|---|
| Start bp | 659473 |
|---|
| End bp | 660213 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637953263 |
|---|
| Product | putative short-chain dehydrogenase/reductase |
|---|
| Protein accession | YP_555883 |
|---|
| Protein GI | 91780676 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.660542 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0297002 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATATGA ATCCGATTGA AGACAAGGTT GTCATGATCA CGGGCGCGAG CAGCGGCATC
GGCGAAGCAA CGGCGCGCCG GCTCGCGCAG CAGGGCGCGA AACTCGTGCT GGCGGCGCGC
AGGAGCGAGC GCCTCAGTCG GCTGGCCGCC CAGCTCGGCG GCGCCGACCG CGTGCTGTGG
GACGCCACCG ACGTGACGAA GCCCGAAGCG CTCCAGCAAC TCGCGGCGAC GGCGCGCGAG
CGTTTCGGGC ACCTCGACGT GCTCGTCAAC AACGCGGGCA TCATGCCGGT TTCGCTGATC
GCGCAAGGCC GCGTCGACGA CTGGAACCGC ATGATCGACG TGAACATCAA GGGCGTGCTG
TACGGCATTC ATGCGGTGCT GGGCGCCATG CTGGAGCGGG GGGTGGGGCA CATCATCAAT
ATTTCGTCGG TGGCGGGCCT GAGCGTCGGG CCGGGCGGCG CGGTCTATTC GGCGACGAAG
TTCGCCGTGC GCGCGATCAG CGAGGGGCTG CGCCAGGAAT GCGCGGGCAA GGTGCGCGTC
ACCTCGATCT GTCCGGGACT CGTGGCGAGC GAGCTGCCGG ACAGCATCAC GGTGCCCGCA
TTCCGCGAGC GCGCGCAGAA GCTGTTCGAA GGGGCGATGC CTGCCGACGC GGTCGCCGAT
GCCATCGTCT ACGCGCTCAC CCAGCCCGAG CAGGTCGCGG TGAACGAAAT CGTCGTGCGG
CCGCTGACCC AGAGCTTTTG A
|
|---|
| Protein sequence | MHMNPIEDKV VMITGASSGI GEATARRLAQ QGAKLVLAAR RSERLSRLAA QLGGADRVLW
DATDVTKPEA LQQLAATARE RFGHLDVLVN NAGIMPVSLI AQGRVDDWNR MIDVNIKGVL
YGIHAVLGAM LERGVGHIIN ISSVAGLSVG PGGAVYSATK FAVRAISEGL RQECAGKVRV
TSICPGLVAS ELPDSITVPA FRERAQKLFE GAMPADAVAD AIVYALTQPE QVAVNEIVVR
PLTQSF
|
|---|
| |