| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0320 |
|---|
| Symbol | |
|---|
| ID | 3961281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 318867 |
|---|
| End bp | 319670 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637915152 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_521605 |
|---|
| Protein GI | 89899134 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.130238 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCT CAGCACACCA AAGTCGACCG GCCATCTTCG TCACGGGTGC GGCCACAGGC
ATCGGGCGCG CCTGCGCCGA ACGGTTTGCA CGGCACGGCT GGTTCGTCGG CCTCTACGAC
ATCGACGCGG ATGGCGCTGC AGAGGTGGCT GCGACCCTGG AGCACGGCTG TGTGGTGGCG
GGTGCACTCG ACGTGACCGA TCCTGATGCG TGGCGGGTCG CACTGGCCCA GTTCTGGGAG
AAGAGCGGTC AGCGACTGGA TGTGCTTTTC AACAATGCTG GGGTGCTGAC CGCAGGCCCC
TTCGAGACCG TCGAATTGGC GAGGCATCAG GGGATGCTGA ACGTGAACGT GCTCGGAATG
ATCAATGGTT GCCACAGTGC TTTCGACTAT CTGCGTCGCA CGCCGGGCGC CCGGGTGATC
AACATGGCCT CCGCTACAGC GATTTACGGA CAGCCTGACC TGGTGACCTA CTCAGCGACC
AAGTTCGCCG TTCGTGGCTT CACAGAGGGG CTGGAACTGG AGTGGCATCG GCACGGCATT
CGTGTCTCAG ATGTGTGGCC CAGCTTCGTG CGGACGGACA TGGCGAAGAA GTTTGAGCGC
ATCGCCAGCG CCAAGTCGCT GGGTGTTCGG CTGATGCCGG ACGATGTTGC CGCCACCGTC
TGGGCCTGTG CAACCAGCCA GTCGCTAGTC CCCAAAACGC ATTGGACCGT TGGCCTTCAG
GCCAGGCTGC TGGCCATCGC AACGAGTGTC TCACCGGCCC CGATCAGCCG TTGGGTGGTG
CGGCAACTTG CACATCAAAC ATAG
|
|---|
| Protein sequence | MTGSAHQSRP AIFVTGAATG IGRACAERFA RHGWFVGLYD IDADGAAEVA ATLEHGCVVA
GALDVTDPDA WRVALAQFWE KSGQRLDVLF NNAGVLTAGP FETVELARHQ GMLNVNVLGM
INGCHSAFDY LRRTPGARVI NMASATAIYG QPDLVTYSAT KFAVRGFTEG LELEWHRHGI
RVSDVWPSFV RTDMAKKFER IASAKSLGVR LMPDDVAATV WACATSQSLV PKTHWTVGLQ
ARLLAIATSV SPAPISRWVV RQLAHQT
|
|---|
| |