Gene Paes_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0175 
Symbol 
ID6459132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp183248 
End bp183991 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content52% 
IMG OID642724167 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_002014881 
Protein GI194333021 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGT TTGAAGGCAA AACCGCCGTC ATCACCGGCG CTGCACGAGG TATCGGCCAG 
GCTATCGCTA TCGACCTTGC AGAAAAAGGC GCTGATATCG TCCTCTGCGA CCTGCAGGAA
GAGTGGCTTG AGGAAACGGC CGCTGCAGTA GCAAAAACAG GCAAAAAAGT TATCTGCAAA
GAACTCGACG TCACCAGTCA TGATGCTGCC CAGAGCGTCT TTCAGGAAAT CGCGGCAGAA
TCAGGCTCAA TAGATATCCT CATCAACAAT GCAGGGATCA CCCGTGACGG TCTGCTCATG
CGCATGAGCG AAGCAGACTG GGATTCAGTG CTTGCCGTCA ACCTGAAAGG AACGTTCAAC
TGCACGAAAG CAGTCACCAG AACCATGATG AAGCAGCGTA GCGGTGCAAT CGTCAATATA
GCCTCCATTA TCGGTCTGAT GGGCAACGCC GGTCAGGCAA ACTACGGAGC ATCAAAAGCC
GGCGTCATCG CGTTCACAAA ATCCATTGCA AAAGAACTTT CATCGCGCAA CATCCGCGTC
AATGCTGTTG CGCCGGGCTT CATCTCCTCA AAAATGACCG ATGCTCTCTC GGAAGATGTC
CGCAACGCCA TGCTTGAGGC AATTCCGCTC AAACGTTTCG GTGAACCGAA AGATGTTGCA
AACGTCGTCA CCTTCCTGGC AAGCGATATG GCAGGCTATA TTACCGGAGA GGTCATCAAC
ATCAGCGGCG GCATGGTCAT GTAA
 
Protein sequence
MSMFEGKTAV ITGAARGIGQ AIAIDLAEKG ADIVLCDLQE EWLEETAAAV AKTGKKVICK 
ELDVTSHDAA QSVFQEIAAE SGSIDILINN AGITRDGLLM RMSEADWDSV LAVNLKGTFN
CTKAVTRTMM KQRSGAIVNI ASIIGLMGNA GQANYGASKA GVIAFTKSIA KELSSRNIRV
NAVAPGFISS KMTDALSEDV RNAMLEAIPL KRFGEPKDVA NVVTFLASDM AGYITGEVIN
ISGGMVM