| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1324 |
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| Symbol | |
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| ID | 3966095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1719603 |
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| End bp | 1720385 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920400 |
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| Product | D-beta-hydroxybutyrate dehydrogenase |
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| Protein accession | YP_526798 |
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| Protein GI | 90020971 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAGTG AGTTTGCTAG TAATGAACCC CGCATAGCAC TTGTTACGGG TGCTGGCAGT
GGTATTGGCG AGGCCATGGC GCTCTCGCTT GGGCGCAGCG GTTATCATGT AGTGGTATCC
GATTTAAATT TGGACGCGGC CCAGCTAGTC TCGGACGCTA TTCAAGCTGT CGGCGGTATG
GCCACAGCGT TTAAGTTGGA TGTAAGCGAT CAGTCTGCAA TCGACTCTGT TGTTTCACAA
TTTCCCAATA TTGATATCTT AGTTAACAAC GCAGGTATTC AATATGTGGC CAAGCTCGAA
TCTTTCCCTG CCGATATGTG GCGCAAATTA AACGATGTAT TGCTTGTTGG CCCAGCCATG
CTAACCCGTG CAGTATTGCC AGGCATGAAG TCGCGCGACT TTGGACGCAT TATTAATGTA
GGCAGCATAC ACGCCCACGT GGCTTCACCT TACAAGAGTG CCTATGTGGC AGCAAAACAC
GGCTTAATTG GGTTTAGCAA AGTAGTGGCG CTAGAAACCG CGCAACACAA TATCACCATT
AATACGCTTT GCCCCTCCTA TGTAAAAACG CCCTTAGTAG AAAAACAAAT AGCGCTGCAA
GCTGCTGAGC ACGGTATTTC TGAAGATGAC GTAATCAATA AAATTATGCT TGAGCCCATG
CCTAAAAAAG CGTTTATTAG CTTTGAAGAG CTAACCGCTA GCATGCATTT TCTAATTTCT
GATGCTGCAA AAAACATGAC GGGGCAATCA CTGGTTATTG ATGGTGGCTG GACAATTAAG
TAG
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| Protein sequence | MSSEFASNEP RIALVTGAGS GIGEAMALSL GRSGYHVVVS DLNLDAAQLV SDAIQAVGGM
ATAFKLDVSD QSAIDSVVSQ FPNIDILVNN AGIQYVAKLE SFPADMWRKL NDVLLVGPAM
LTRAVLPGMK SRDFGRIINV GSIHAHVASP YKSAYVAAKH GLIGFSKVVA LETAQHNITI
NTLCPSYVKT PLVEKQIALQ AAEHGISEDD VINKIMLEPM PKKAFISFEE LTASMHFLIS
DAAKNMTGQS LVIDGGWTIK
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