Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1324 |
Symbol | |
ID | 3966095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1719603 |
End bp | 1720385 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637920400 |
Product | D-beta-hydroxybutyrate dehydrogenase |
Protein accession | YP_526798 |
Protein GI | 90020971 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGTG AGTTTGCTAG TAATGAACCC CGCATAGCAC TTGTTACGGG TGCTGGCAGT GGTATTGGCG AGGCCATGGC GCTCTCGCTT GGGCGCAGCG GTTATCATGT AGTGGTATCC GATTTAAATT TGGACGCGGC CCAGCTAGTC TCGGACGCTA TTCAAGCTGT CGGCGGTATG GCCACAGCGT TTAAGTTGGA TGTAAGCGAT CAGTCTGCAA TCGACTCTGT TGTTTCACAA TTTCCCAATA TTGATATCTT AGTTAACAAC GCAGGTATTC AATATGTGGC CAAGCTCGAA TCTTTCCCTG CCGATATGTG GCGCAAATTA AACGATGTAT TGCTTGTTGG CCCAGCCATG CTAACCCGTG CAGTATTGCC AGGCATGAAG TCGCGCGACT TTGGACGCAT TATTAATGTA GGCAGCATAC ACGCCCACGT GGCTTCACCT TACAAGAGTG CCTATGTGGC AGCAAAACAC GGCTTAATTG GGTTTAGCAA AGTAGTGGCG CTAGAAACCG CGCAACACAA TATCACCATT AATACGCTTT GCCCCTCCTA TGTAAAAACG CCCTTAGTAG AAAAACAAAT AGCGCTGCAA GCTGCTGAGC ACGGTATTTC TGAAGATGAC GTAATCAATA AAATTATGCT TGAGCCCATG CCTAAAAAAG CGTTTATTAG CTTTGAAGAG CTAACCGCTA GCATGCATTT TCTAATTTCT GATGCTGCAA AAAACATGAC GGGGCAATCA CTGGTTATTG ATGGTGGCTG GACAATTAAG TAG
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Protein sequence | MSSEFASNEP RIALVTGAGS GIGEAMALSL GRSGYHVVVS DLNLDAAQLV SDAIQAVGGM ATAFKLDVSD QSAIDSVVSQ FPNIDILVNN AGIQYVAKLE SFPADMWRKL NDVLLVGPAM LTRAVLPGMK SRDFGRIINV GSIHAHVASP YKSAYVAAKH GLIGFSKVVA LETAQHNITI NTLCPSYVKT PLVEKQIALQ AAEHGISEDD VINKIMLEPM PKKAFISFEE LTASMHFLIS DAAKNMTGQS LVIDGGWTIK
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