| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3768 |
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| Symbol | |
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| ID | 5077916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 405900 |
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| End bp | 406670 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640481491 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001166153 |
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| Protein GI | 146275993 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0560932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGGA CATTCGAAGG CAAGGTCGCA CTGGTGACCG GAGCGGCATC GGGCATCGGC
CGGGCCGCCG CGATCCGCTT TGCAGAGGAA GGCGCCAGGG TTTTCTGCGC GGACCTCAAC
CTTGCCGGCG CCGAAGCAGT CGCGGCAGGC ATCGGCAAGG GCGCGAGCGC GGTGCAGGTC
GATGTCGCGA GCTATGCCAG CAACCAGGCG ATGGTCGACG CGGTCATGGC CAACGCAGGC
CAGCTTGACG TGGCATTCCT CAACGCCGGC TTCTACGGCG CCGCGGAAGG GCTCGACACG
GTGGACGAAG CGCTGTTCGA CCGCCTCGTC GCGATCAACC TCAAGGGCGC GTTCAACGGC
ATCAAGGCGG TGCAGGCCGT GATTGCGACA GGTGGCGCCG TGGTGGTCAC CGCTTCGGCG
GCGGGCATCG TGGGGCATCC GGCAAACCCG GCTTACAGCG CGGCCAAGCA CGGCGTGGTC
GGCCTGGTGA AATCCTGCGT CGATGCATTT GCTGCGCGCG GCGCGCGGAT CAACGCGCTC
TGCCCCGGCG GCGTGGAAAC GCCGCTGATC GGCGCGCCCG ACGTTGCCAT CGTCCCGGCC
GCGGATCTGC CGCGCGTGCC TGCGCGCGGA ATGGGCCGGG CGCAGCATGT GGCCGAAGTG
GCGCTGTGGC TGTCGAGCCC CGCTGCCGGC TTCATCACCG GCCAGGCGCA GGTTCTCGAC
GCGGGCCTGC TTTCGACATT CGCGCCGGTC ATGCTGCCGG TCGGTCCCTG A
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| Protein sequence | MAGTFEGKVA LVTGAASGIG RAAAIRFAEE GARVFCADLN LAGAEAVAAG IGKGASAVQV
DVASYASNQA MVDAVMANAG QLDVAFLNAG FYGAAEGLDT VDEALFDRLV AINLKGAFNG
IKAVQAVIAT GGAVVVTASA AGIVGHPANP AYSAAKHGVV GLVKSCVDAF AARGARINAL
CPGGVETPLI GAPDVAIVPA ADLPRVPARG MGRAQHVAEV ALWLSSPAAG FITGQAQVLD
AGLLSTFAPV MLPVGP
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