| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0884 |
|---|
| Symbol | |
|---|
| ID | 4787207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 925843 |
|---|
| End bp | 926616 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640089445 |
|---|
| Product | dehydrogenase |
|---|
| Protein accession | YP_001020081 |
|---|
| Protein GI | 124266077 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACGTG TGGACAACAA GGTGGCGCTG GTGACCGGTG GTGCCAAGGG CATCGGCCGG
GCCAGCGCAC TGATGCTGGC GCGCGAAGGT GCCCGCGTGG TGCTGACCGA CGTGGAAGAG
GCGCAGGGCA GCGCGGTGGC GAAGGAGATC GAGCGCGCCG GCGGCAAGGC GCTGTTCCTC
ACGCAGGACG TGACCGACGA GAGCCGCTGG GTCGAGGTGG TCGAGAAGGC CCGCGCGCAG
TTCGGCGGCC TGAACATCGT CGTCAACAAC GCCGGCATCG GCACCGCTGG CAGCGCCGAG
GACGAGACGC TGGAGGCCTG GCGCCGCCTG ATGTCCGTCA ACCTCGACGG CGTCTTCCTC
GGCACCAAGC ACGCGATCCG GGCGATGAAG AACGGGCCCG GCACGGGCTC GATCATCAAC
ATCTCGTCGA TCGAGGGCAT CGTCGCCGAC CCCAAGCTCG CGTCCTACAA CGCCAGCAAG
GGCGGCGTGC GCATCTTCTC GAAGTCGGCG GCACTGCATT GCGCGCAGGC GGGCTACCGC
ATCCGGGTTA ACACCATCCA TCCGGGCTAC ATCTGGACGC CGATGGTCGA AGGCTATCTG
ACCAGCCTCG GCGATGTCGA GGGTGGGCGC CAGGTCATCT CGAAGATGCA CCCGATCGGG
CGGATGGGTG AGCCCGACGA CATCGCCTAC GGTGTGCTCT ACCTGGGCTC CGACGAGTCC
TCGTTCATGA CGGGCAGCGA GCTGGTCATC GACGGCGGCT ACACCGCGCA ATAG
|
|---|
| Protein sequence | MGRVDNKVAL VTGGAKGIGR ASALMLAREG ARVVLTDVEE AQGSAVAKEI ERAGGKALFL
TQDVTDESRW VEVVEKARAQ FGGLNIVVNN AGIGTAGSAE DETLEAWRRL MSVNLDGVFL
GTKHAIRAMK NGPGTGSIIN ISSIEGIVAD PKLASYNASK GGVRIFSKSA ALHCAQAGYR
IRVNTIHPGY IWTPMVEGYL TSLGDVEGGR QVISKMHPIG RMGEPDDIAY GVLYLGSDES
SFMTGSELVI DGGYTAQ
|
|---|
| |