More than 300 homologs were found in PanDaTox collection
for query gene Tpau_0045 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_0045  short-chain dehydrogenase/reductase SDR  100 
 
 
297 aa  582  1.0000000000000001e-165  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0217  short chain dehydrogenase  40.22 
 
 
286 aa  185  8e-46  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.743608  normal 
 
 
-
 
NC_008146  Mmcs_0528  short chain dehydrogenase  40.59 
 
 
287 aa  182  4.0000000000000006e-45  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0540  short chain dehydrogenase  40.59 
 
 
287 aa  182  4.0000000000000006e-45  Mycobacterium sp. KMS  Bacteria  normal  0.0506548  normal 
 
 
-
 
NC_009077  Mjls_0518  short chain dehydrogenase  40.59 
 
 
287 aa  182  4.0000000000000006e-45  Mycobacterium sp. JLS  Bacteria  normal  0.693984  normal 
 
 
-
 
NC_008726  Mvan_0690  short chain dehydrogenase  40.59 
 
 
292 aa  179  4e-44  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0965776 
 
 
-
 
NC_013441  Gbro_3792  short-chain dehydrogenase/reductase SDR  42.05 
 
 
290 aa  178  1e-43  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3561  short chain dehydrogenase  47.58 
 
 
276 aa  176  5e-43  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3722  short-chain dehydrogenase/reductase SDR  39.47 
 
 
267 aa  171  1e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  0.848764  n/a   
 
 
-
 
NC_013739  Cwoe_5919  short-chain dehydrogenase/reductase SDR  41.11 
 
 
295 aa  169  4e-41  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11893  short chain dehydrogenase  40.43 
 
 
286 aa  166  4e-40  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.361469 
 
 
-
 
NC_008726  Mvan_2345  short chain dehydrogenase  42.44 
 
 
297 aa  148  9e-35  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.190376  hitchhiker  0.00770319 
 
 
-
 
NC_009077  Mjls_4348  short-chain dehydrogenase/reductase SDR  35.61 
 
 
274 aa  131  1.0000000000000001e-29  Mycobacterium sp. JLS  Bacteria  normal  normal  0.201544 
 
 
-
 
NC_008146  Mmcs_4117  short-chain dehydrogenase/reductase SDR  35.61 
 
 
274 aa  131  1.0000000000000001e-29  Mycobacterium sp. MCS  Bacteria  normal  0.0106138  n/a   
 
 
-
 
NC_009338  Mflv_2070  short-chain dehydrogenase/reductase SDR  36.68 
 
 
275 aa  132  1.0000000000000001e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0241632 
 
 
-
 
NC_008705  Mkms_4192  short-chain dehydrogenase/reductase SDR  35.61 
 
 
274 aa  131  1.0000000000000001e-29  Mycobacterium sp. KMS  Bacteria  normal  0.879856  normal 
 
 
-
 
NC_009427  Saro_3667  short-chain dehydrogenase/reductase SDR  38.64 
 
 
259 aa  129  6e-29  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_0214  short-chain dehydrogenase/reductase SDR  37.3 
 
 
245 aa  129  7.000000000000001e-29  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_0235  short-chain dehydrogenase/reductase SDR  36.76 
 
 
244 aa  128  1.0000000000000001e-28  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_1156  short-chain dehydrogenase/reductase SDR  41.24 
 
 
280 aa  124  2e-27  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.434492  n/a   
 
 
-
 
NC_013457  VEA_000420  oxidoreductase short-chain dehydrogenase/reductase family  38.25 
 
 
239 aa  124  2e-27  Vibrio sp. Ex25  Bacteria  normal  0.637186  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  33.46 
 
 
264 aa  123  3e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  33.46 
 
 
264 aa  123  3e-27  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008726  Mvan_3101  short-chain dehydrogenase/reductase SDR  38.4 
 
 
280 aa  122  5e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.300242  normal  0.231356 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  33.07 
 
 
264 aa  122  7e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  33.07 
 
 
264 aa  122  7e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  33.07 
 
 
264 aa  122  7e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0194  Short-chain dehydrogenase/reductase SDR  39.27 
 
 
244 aa  122  8e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  33.07 
 
 
264 aa  121  1.9999999999999998e-26  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_007413  Ava_0943  Short-chain dehydrogenase/reductase SDR  32.08 
 
 
293 aa  120  1.9999999999999998e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  32.68 
 
 
264 aa  119  4.9999999999999996e-26  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4325  Short-chain dehydrogenase/reductase SDR  39.34 
 
 
241 aa  119  7e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.715564 
 
 
-
 
NC_013525  Tter_0451  short-chain dehydrogenase/reductase SDR  32.69 
 
 
339 aa  119  9e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0184  short chain dehydrogenase/reductase family oxidoreductase  38.04 
 
 
239 aa  118  9.999999999999999e-26  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0391  short-chain dehydrogenase/reductase SDR  33.48 
 
 
279 aa  117  1.9999999999999998e-25  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.319463  normal 
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  31.89 
 
 
264 aa  116  3e-25  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  31.5 
 
 
264 aa  117  3e-25  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2470  Short-chain dehydrogenase/reductase SDR  39.06 
 
 
244 aa  116  3.9999999999999997e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0808  short-chain dehydrogenase/reductase SDR  39.09 
 
 
252 aa  116  3.9999999999999997e-25  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4853  short-chain dehydrogenase/reductase SDR  37.04 
 
 
248 aa  115  6e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.154391  normal  0.241568 
 
 
-
 
NC_013595  Sros_6830  oxidoreductase  40.78 
 
 
265 aa  115  6.9999999999999995e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.356358 
 
 
-
 
BN001305  ANIA_05318  hypothetical protein similar to nonribosomal peptide synthetase 10 (Broad)  35.4 
 
 
1270 aa  115  7.999999999999999e-25  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.556036  normal  0.849429 
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  31.92 
 
 
264 aa  115  7.999999999999999e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_008782  Ajs_2100  short-chain dehydrogenase/reductase SDR  35.83 
 
 
250 aa  115  7.999999999999999e-25  Acidovorax sp. JS42  Bacteria  normal  0.0527344  normal 
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  31.1 
 
 
264 aa  115  8.999999999999998e-25  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5738  short-chain dehydrogenase/reductase SDR  35.23 
 
 
257 aa  115  8.999999999999998e-25  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.759988  normal  0.0474831 
 
 
-
 
NC_009636  Smed_2462  short chain dehydrogenase  38.81 
 
 
254 aa  114  1.0000000000000001e-24  Sinorhizobium medicae WSM419  Bacteria  normal  0.131471  normal 
 
 
-
 
NC_009784  VIBHAR_05303  oxidoreductase  35.52 
 
 
239 aa  114  1.0000000000000001e-24  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008726  Mvan_1975  3-ketoacyl-(acyl-carrier-protein) reductase  34.18 
 
 
252 aa  114  1.0000000000000001e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.636697  normal 
 
 
-
 
NC_010505  Mrad2831_5451  short-chain dehydrogenase/reductase SDR  35.59 
 
 
281 aa  114  2.0000000000000002e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.255746 
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  31.34 
 
 
295 aa  114  2.0000000000000002e-24  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_007633  MCAP_0256  short chain dehydrogenase/reductase family oxidoreductase  33.33 
 
 
239 aa  114  2.0000000000000002e-24  Mycoplasma capricolum subsp. capricolum ATCC 27343  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_3264  short-chain dehydrogenase/reductase SDR  41.53 
 
 
243 aa  114  3e-24  Pseudomonas putida GB-1  Bacteria  normal  normal  0.138701 
 
 
-
 
NC_007511  Bcep18194_B3095  3-oxoacyl-[acyl-carrier-protein] reductase  35.98 
 
 
246 aa  114  3e-24  Burkholderia sp. 383  Bacteria  normal  normal  0.025547 
 
 
-
 
NC_007760  Adeh_3205  short-chain dehydrogenase/reductase SDR  39.57 
 
 
244 aa  113  3e-24  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_2238  short-chain dehydrogenase/reductase SDR  37.5 
 
 
317 aa  113  3e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1990  short-chain dehydrogenase/reductase SDR  37.23 
 
 
249 aa  113  3e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0729  short-chain dehydrogenase/reductase SDR  34.9 
 
 
251 aa  113  5e-24  Petrotoga mobilis SJ95  Bacteria  normal  0.0262547  n/a   
 
 
-
 
NC_011060  Ppha_1918  short-chain dehydrogenase/reductase SDR  37.3 
 
 
280 aa  112  6e-24  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.000963224  n/a   
 
 
-
 
NC_010513  Xfasm12_0942  short chain dehydrogenase  31.72 
 
 
268 aa  112  6e-24  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1462  short-chain dehydrogenase/reductase SDR  34.14 
 
 
266 aa  112  6e-24  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0916  short-chain dehydrogenase/reductase SDR  37.7 
 
 
246 aa  112  7.000000000000001e-24  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2203  short chain dehydrogenase  37.1 
 
 
273 aa  112  7.000000000000001e-24  Marinobacter aquaeolei VT8  Bacteria  decreased coverage  0.000419362  n/a   
 
 
-
 
NC_010483  TRQ2_1110  3-oxoacyl-(acyl-carrier-protein) reductase  35.6 
 
 
246 aa  112  8.000000000000001e-24  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4479  short-chain dehydrogenase/reductase SDR  32.49 
 
 
276 aa  112  8.000000000000001e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0643496  normal  0.318534 
 
 
-
 
NC_008463  PA14_46600  short chain dehydrogenase  39.67 
 
 
268 aa  112  9e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000000000000918039  hitchhiker  0.00000172259 
 
 
-
 
NC_007336  Reut_C6404  3-oxoacyl-[acyl-carrier-protein] reductase  34.6 
 
 
246 aa  112  1.0000000000000001e-23  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0320  short chain dehydrogenase  37.32 
 
 
267 aa  111  1.0000000000000001e-23  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_009943  Dole_1249  short-chain dehydrogenase/reductase SDR  35.32 
 
 
273 aa  111  1.0000000000000001e-23  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0626824  n/a   
 
 
-
 
NC_010501  PputW619_3131  short-chain dehydrogenase/reductase SDR  37.37 
 
 
245 aa  112  1.0000000000000001e-23  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0761  short-chain dehydrogenase/reductase SDR  30.42 
 
 
277 aa  112  1.0000000000000001e-23  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.416641 
 
 
-
 
NC_009511  Swit_3288  short-chain dehydrogenase/reductase SDR  34.92 
 
 
264 aa  111  1.0000000000000001e-23  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.197949 
 
 
-
 
NC_009656  PSPA7_3623  short chain dehydrogenase  39.47 
 
 
253 aa  112  1.0000000000000001e-23  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0211534  n/a   
 
 
-
 
NC_008752  Aave_2790  short-chain dehydrogenase/reductase SDR  37.31 
 
 
269 aa  110  2.0000000000000002e-23  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1603  short-chain dehydrogenase/reductase SDR  33.71 
 
 
277 aa  110  2.0000000000000002e-23  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009427  Saro_3738  short-chain dehydrogenase/reductase SDR  34.51 
 
 
253 aa  111  2.0000000000000002e-23  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3907  short-chain dehydrogenase/reductase SDR  36.46 
 
 
246 aa  110  2.0000000000000002e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.267776 
 
 
-
 
NC_009338  Mflv_4505  short-chain dehydrogenase/reductase SDR  38.5 
 
 
260 aa  111  2.0000000000000002e-23  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3321  short-chain dehydrogenase/reductase SDR  29.27 
 
 
351 aa  110  2.0000000000000002e-23  Spirosoma linguale DSM 74  Bacteria  normal  0.358421  normal 
 
 
-
 
NC_007950  Bpro_5564  short-chain dehydrogenase/reductase SDR  34.22 
 
 
250 aa  110  2.0000000000000002e-23  Polaromonas sp. JS666  Bacteria  normal  0.0387947  normal 
 
 
-
 
NC_010085  Nmar_1786  short-chain dehydrogenase/reductase SDR  33.33 
 
 
246 aa  110  2.0000000000000002e-23  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_013440  Hoch_5364  short-chain dehydrogenase/reductase SDR  38.92 
 
 
267 aa  110  2.0000000000000002e-23  Haliangium ochraceum DSM 14365  Bacteria  normal  0.676071  normal 
 
 
-
 
NC_013132  Cpin_1988  short-chain dehydrogenase/reductase SDR  35.42 
 
 
260 aa  110  3e-23  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.730129 
 
 
-
 
NC_011831  Cagg_0630  3-oxoacyl-(acyl-carrier-protein) reductase  34.25 
 
 
246 aa  110  3e-23  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  36.49 
 
 
273 aa  110  3e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1020  3-oxoacyl-(acyl-carrier-protein) reductase  35.08 
 
 
246 aa  110  3e-23  Thermotoga petrophila RKU-1  Bacteria  normal  0.0122832  n/a   
 
 
-
 
NC_008699  Noca_3699  short-chain dehydrogenase/reductase SDR  34.85 
 
 
280 aa  110  3e-23  Nocardioides sp. JS614  Bacteria  normal  0.0817481  n/a   
 
 
-
 
NC_010501  PputW619_2737  short-chain dehydrogenase/reductase SDR  36.65 
 
 
245 aa  110  3e-23  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  30.36 
 
 
278 aa  110  3e-23  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_008740  Maqu_0158  short-chain dehydrogenase/reductase SDR  33.33 
 
 
271 aa  110  3e-23  Marinobacter aquaeolei VT8  Bacteria  normal  0.722445  n/a   
 
 
-
 
NC_010338  Caul_4322  short chain dehydrogenase  34.86 
 
 
269 aa  109  4.0000000000000004e-23  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  30.04 
 
 
264 aa  110  4.0000000000000004e-23  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_009077  Mjls_3322  short chain dehydrogenase  39.9 
 
 
588 aa  110  4.0000000000000004e-23  Mycobacterium sp. JLS  Bacteria  normal  normal  0.178301 
 
 
-
 
NC_008146  Mmcs_3311  short chain dehydrogenase  39.9 
 
 
588 aa  110  4.0000000000000004e-23  Mycobacterium sp. MCS  Bacteria  normal  0.768628  n/a   
 
 
-
 
NC_008705  Mkms_3373  short chain dehydrogenase  39.9 
 
 
588 aa  110  4.0000000000000004e-23  Mycobacterium sp. KMS  Bacteria  normal  0.855673  normal  0.12205 
 
 
-
 
NC_013739  Cwoe_3253  short-chain dehydrogenase/reductase SDR  31.6 
 
 
264 aa  109  6e-23  Conexibacter woesei DSM 14684  Bacteria  normal  0.200417  normal  0.189117 
 
 
-
 
NC_013730  Slin_2186  short-chain dehydrogenase/reductase SDR  35.26 
 
 
248 aa  109  6e-23  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0361624 
 
 
-
 
NC_010681  Bphyt_0979  short-chain dehydrogenase/reductase SDR  32.77 
 
 
246 aa  109  6e-23  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3804  short-chain dehydrogenase/reductase SDR  37 
 
 
253 aa  109  7.000000000000001e-23  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0415  short-chain dehydrogenase/reductase SDR  36.98 
 
 
257 aa  108  8.000000000000001e-23  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.560297 
 
 
-
 
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