Gene Ppha_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0197 
Symbol 
ID6461983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp193636 
End bp194373 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content54% 
IMG OID642726491 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_002017151 
Protein GI194335357 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAAG GAAAAATCGC TGTTGTCACT GGTAGCGCCA GAGGAATCGG ACAGGCCATC 
GCTTTTGATC TGGCTGCCCG AGGCGCCGAT ATTGTCGTAT GCGATATCAA AGCCGAATGG
CTGACGGAAA CAGCCGAAGG TGTTGAGAAA CTTGGCCGAA AAGCCTACTG CTTCGAACTC
GATGTCACCA ACGCTGAAGC GGTGCAGAAC GTCTTCAATG ACATTGCTGC CGCAACAGGA
AGAATCGACA TCCTTGTCAA TAATGCCGGC ATAACCCGTG ATGGCCTGTT AATGCGGATG
AGCGAAGAGG ACTGGGATGC TGTGCTCACG GTCAACCTGA AAGGAACTTT CGTCTGCACC
AAAGCGGTCA GCCGCATCAT GATGAAGCAG CGCTCCGGCT CGATCATCAA CATCGCCTCG
GTCGTTGGGC TCATGGGCAA TGCCGGACAG GCCAACTATG CGGCATCAAA GGGAGGCGTC
ATTGCCTTCA CCAAATCAGT CGCAAAAGAG CTGGCATCGC GCAACATAAG GGCCAATGCC
GTCGCACCAG GCTTCATCTC CTCGAAAATG ACCGATGCGC TTTCCGATGA AGTCCGCCAG
AAAATGCTCG ACGCCATACC GCTCTCCAGC TTCGGCACAC CGCAGGATGT AGCCAATGCC
GTTGCCTTTC TGGCTGGCGA ACAATCCTCA TACATCACCG GCCAGGTCAT CAGCGTCAAT
GGCGGTATGG TAATGTGA
 
Protein sequence
MFEGKIAVVT GSARGIGQAI AFDLAARGAD IVVCDIKAEW LTETAEGVEK LGRKAYCFEL 
DVTNAEAVQN VFNDIAAATG RIDILVNNAG ITRDGLLMRM SEEDWDAVLT VNLKGTFVCT
KAVSRIMMKQ RSGSIINIAS VVGLMGNAGQ ANYAASKGGV IAFTKSVAKE LASRNIRANA
VAPGFISSKM TDALSDEVRQ KMLDAIPLSS FGTPQDVANA VAFLAGEQSS YITGQVISVN
GGMVM