| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3541 |
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| Symbol | |
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| ID | 4582096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 690013 |
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| End bp | 690750 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639770854 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_917307 |
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| Protein GI | 119386252 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0724281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.787081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCTC AACCGCTTAC CACCGCAATC GTGACGGGCG CAGGCTCGGG CATAGGCCGG
GCTATCGCGC ATCGCCTGGC TGACGAGGGC CATGCCGTCG TCGTGGCCGA CCGTGCCGCC
GAGGGGGCGC AGGAAACCGT GCGCCAGCTT GTCGCCATGG GCCGCAGCGC CCGCGCCGCC
GTGCTGGACA TCACCGACCC GGCGGCGACG CAGGCGCTGA TCGACGGCGC GGAAAACCTG
CGCGTGCTGG TCAACAATGC CGGCATCTTC AACACCTGCG CATTCGATGC GCTGACCGCC
GACGATTTCC GCGGGATGTA TGAGGTCAAC CTGGTCGCCA TGTTCACCCT TTGCCAGCAG
GCGGCCCGCG TGCTGCCCGA GGGCGGACGG ATCGTGAACC TTGCGTCGCG CGCGGCCTTC
GGGGCGCGGA ACTATGCGCA TTACGTCGCC TCCAAGGCGG CGGTCGCCGG CTTGACCAAG
GCATTGGCGC TGGAACTGGC CGGGCGGCAG ATCACCGTGA ATGCGGTGGC TCCGGGCGTG
ATCGCGACCG ACATGCTGCT GGAACGGTCC GAGGGGCTGG AGGGCCTGCG CGTCCAGCAA
CCCACCGGCA AGCTGGGCAC GCCCGAGCAT ATCGCCCATG CGGTCGCCTT TTTCGCCGAT
CCGCGTGCGG AATATGTCAC CGGGCAAGTG CTGATCGTCG ATGGCGGCCG CTCGGTCGGC
GGCACCGCGG CATTCTGA
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| Protein sequence | MTSQPLTTAI VTGAGSGIGR AIAHRLADEG HAVVVADRAA EGAQETVRQL VAMGRSARAA
VLDITDPAAT QALIDGAENL RVLVNNAGIF NTCAFDALTA DDFRGMYEVN LVAMFTLCQQ
AARVLPEGGR IVNLASRAAF GARNYAHYVA SKAAVAGLTK ALALELAGRQ ITVNAVAPGV
IATDMLLERS EGLEGLRVQQ PTGKLGTPEH IAHAVAFFAD PRAEYVTGQV LIVDGGRSVG
GTAAF
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