Gene Saro_3619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3619 
Symbol 
ID5077768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp242308 
End bp243177 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content66% 
IMG OID640481343 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001166005 
Protein GI146275845 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGTG AGACAGACAA TCGGGACCGG GATGCTTTCG CGGGCGGCGT GGCCGTCATT 
ACCGGTGCCG GATCGGGCAT CGGCGCGGGG CTGGCGCGGC GCGCGGGCGA ACTGGGGATG
ACGGTGGTCG TCACCGACAT CAACCAGGAA GGCGCGGCGC GCACCGTGGG CGAGATCGAG
GCGGCGGGCG GCAAGGCCGA GGCGCTGCGC GTCGACGTTT CGCAGCCCGA GGAGCTCGAC
CGTCTGGCCG AGACGGTCTT CGCGCGCCAC GGCGAAGTGC GGCTGCTCAT CAACAACGCC
GGCATCGAGA CGGTCGGCTA TACCTGGGAA GTCCCTGCCG CTCGTTGGGA GGCGACGCTC
AACATCAACC TCCACGGCGT GATACACGGC GTCCGCGCCT TCGTGCCGCG CATGATCGAA
AGCGGCAAGG AAGCGTGGAT CGGCAACCTC TCGTCGGTCG GCGCGTTCGG CGCGATGCCG
GCCCAGACCG CCTACGTGGT GACCAAGCAT GCTGTGCAGT CGTTCACCGA ATGCCTCTAT
CTGGAAATGC AGCTCAAGGG CCTGCCGATC CATGTTTCGG CGATCGTGCC CGGCATGATC
CGCACCAACA TCTTCAACGC CGAGGCCGGC GACGGCGAGC CGGCGCATTC GCAGGCCCAT
CGCCGCGCAA TGTTCGAGAT GATGCGCGAC TACGGCATGG ACCTCGATGA AGGGTGCCGC
CTGTTCCTTG AACAGATGGC CGAGAAGAAG TTCTGGGCGC ACAGCCAGCC CGACCAGAGC
GAGCAGATCA TCGCCGGACG CATCCGCTTC CTTCAGGAGC AGATTCCGCC GATCATGCCC
GACATAGCGC TCCAGATCGC GAGGGATTGA
 
Protein sequence
MARETDNRDR DAFAGGVAVI TGAGSGIGAG LARRAGELGM TVVVTDINQE GAARTVGEIE 
AAGGKAEALR VDVSQPEELD RLAETVFARH GEVRLLINNA GIETVGYTWE VPAARWEATL
NINLHGVIHG VRAFVPRMIE SGKEAWIGNL SSVGAFGAMP AQTAYVVTKH AVQSFTECLY
LEMQLKGLPI HVSAIVPGMI RTNIFNAEAG DGEPAHSQAH RRAMFEMMRD YGMDLDEGCR
LFLEQMAEKK FWAHSQPDQS EQIIAGRIRF LQEQIPPIMP DIALQIARD