Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1436 |
Symbol | |
ID | 4895853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1489923 |
End bp | 1490696 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640112024 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001043318 |
Protein GI | 126462204 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00798692 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATCTGA ACGGCAAGCG GGCAATCGTC ACCGGCTCGA ACTCGGGCAT CGGGCTGGGC TGCGCCGAAG AGCTGGCGCG CGCCGGCGCC GAGATTGTCA TCAACTCCTT CACCGACCGC GACGAGGATC ACGCGCTGGC CGAGAAGATC GGCCGCGAAC ATGGCGTGAG CTGCCGCTAC ATCGCGGCCG ACATGTCGGA CGGCGAAGCG TGCCGGGCGC TGATCGAGAC GGCGGGCGGC TGCGATATCC TCGTGAACAA TGCGGGCATC CAGCATGTCT CGTCGATCGA GGAGTTTCCG GTCGAGAAGT GGAACGCGAT CCTCGCGATC AACCTCTCGT CGGCCTTCCA CACCACGGCG GCGGCGCTGC CGGGGATGCG GGCGAAGGGC TGGGGGCGGA TCGTCAACAT CGCCTCGGCG CACGGGCTGA CGGCGAGCCC CTACAAGTCG GCCTATGTCG CGGCCAAGCA CGGGGTGGTG GGCTTCACCA AGGTCACCGC GCTCGAAACC GCGGGCAAGG GCATCACCTG CAACGCGATC TGCCCGGGCT ATGTGCTGAC GCCGCTGGTC GAGGCCCAGA TCCCCGACCA GATGAAGGCG CACGACATGG ACCGCGAGAC GGTGATCCGC GAGGTGATGC TCGACCGCCA GCCCTCGCGG CAGTTCGCCA CGACCGGACA GATCGGCGGC ACGGTCGTGT TCCTCTGCTC GGGTGCGGCC GATCAGATCA CCGGGACGAC GATCTCGGTG GATGGGGGCT GGACCGCCCT CTGA
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Protein sequence | MDLNGKRAIV TGSNSGIGLG CAEELARAGA EIVINSFTDR DEDHALAEKI GREHGVSCRY IAADMSDGEA CRALIETAGG CDILVNNAGI QHVSSIEEFP VEKWNAILAI NLSSAFHTTA AALPGMRAKG WGRIVNIASA HGLTASPYKS AYVAAKHGVV GFTKVTALET AGKGITCNAI CPGYVLTPLV EAQIPDQMKA HDMDRETVIR EVMLDRQPSR QFATTGQIGG TVVFLCSGAA DQITGTTISV DGGWTAL
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