Gene Rsph17029_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1436 
Symbol 
ID4895853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1489923 
End bp1490696 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID640112024 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_001043318 
Protein GI126462204 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00798692 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCTGA ACGGCAAGCG GGCAATCGTC ACCGGCTCGA ACTCGGGCAT CGGGCTGGGC 
TGCGCCGAAG AGCTGGCGCG CGCCGGCGCC GAGATTGTCA TCAACTCCTT CACCGACCGC
GACGAGGATC ACGCGCTGGC CGAGAAGATC GGCCGCGAAC ATGGCGTGAG CTGCCGCTAC
ATCGCGGCCG ACATGTCGGA CGGCGAAGCG TGCCGGGCGC TGATCGAGAC GGCGGGCGGC
TGCGATATCC TCGTGAACAA TGCGGGCATC CAGCATGTCT CGTCGATCGA GGAGTTTCCG
GTCGAGAAGT GGAACGCGAT CCTCGCGATC AACCTCTCGT CGGCCTTCCA CACCACGGCG
GCGGCGCTGC CGGGGATGCG GGCGAAGGGC TGGGGGCGGA TCGTCAACAT CGCCTCGGCG
CACGGGCTGA CGGCGAGCCC CTACAAGTCG GCCTATGTCG CGGCCAAGCA CGGGGTGGTG
GGCTTCACCA AGGTCACCGC GCTCGAAACC GCGGGCAAGG GCATCACCTG CAACGCGATC
TGCCCGGGCT ATGTGCTGAC GCCGCTGGTC GAGGCCCAGA TCCCCGACCA GATGAAGGCG
CACGACATGG ACCGCGAGAC GGTGATCCGC GAGGTGATGC TCGACCGCCA GCCCTCGCGG
CAGTTCGCCA CGACCGGACA GATCGGCGGC ACGGTCGTGT TCCTCTGCTC GGGTGCGGCC
GATCAGATCA CCGGGACGAC GATCTCGGTG GATGGGGGCT GGACCGCCCT CTGA
 
Protein sequence
MDLNGKRAIV TGSNSGIGLG CAEELARAGA EIVINSFTDR DEDHALAEKI GREHGVSCRY 
IAADMSDGEA CRALIETAGG CDILVNNAGI QHVSSIEEFP VEKWNAILAI NLSSAFHTTA
AALPGMRAKG WGRIVNIASA HGLTASPYKS AYVAAKHGVV GFTKVTALET AGKGITCNAI
CPGYVLTPLV EAQIPDQMKA HDMDRETVIR EVMLDRQPSR QFATTGQIGG TVVFLCSGAA
DQITGTTISV DGGWTAL