Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0045 |
Symbol | |
ID | 9154179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 48335 |
End bp | 49228 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003645038 |
Protein GI | 296137795 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTTC TCGACCGGCT ACTCCCGATC GGCGGCAGGC GCCGCCCCGA CCTGAACGGG GCGGTGGTCG TCGTCACAGG TGGTGCGCGC GGCATCGGAG CGGCGACGGC CCGGCTGTTC GCGCAGCAGG GCGCACGGGT CTGGATCGGC GATATCGACC CGGACGTGGC GCACACGACC GCTCAGACGA TCCCCGGCGC CCGCGCCGGG TACCTCGACG TGACCGACCG GGCCTCGTGG GACACCCTCC TCACCGAGGT CACCGCCGCA GCGGGACCGG TGGACGTGCT CGTCAACAAC GCCGGTGTGA TGCCTCTCGG CCACTTCGAA TCCGAGGCCG AGGCCACCAC CGATCTGATC CTGGACGTGA ACGTGCGCGG CATGCTCAAC GGCATGCGCG CGACGATCCC GGCGATGGTG CACCGCGGAC ACGGACACGT GGTGAACGTC GCGTCGATGG CGGGCATGAT CCCGCTCCCC GGAATGGTCA CCTACAACGC GAGCAAGTTC GCCGCACTCG GCGCCTCCCT CGGCGCACGC CGCGAGTACG ACGGCACCGG CGTCGCAGTG TGCGCGATCC TGCCCGCCGC CGTCCGCACC GAGCTCTCAT CGGGCGCCGA GCTCGGCGGC GCACTCCCCA CCGTCGATCC GGAGGACGTC GCCGCCGCCG TGGTCGACAC GATGCGCACC CGGGCCGCCC GGACATCGGT GCCGAAATGG GTCGCCCCCG GCTGGAGCCT GGTGGATGCC TTCGTGCCCG AGCCGGTGGA ACGACTCGCG CGGCGCCTCG CCGGCGATCG GCGCGGCCTC GACCTCGACG CGGACGCCCG CCGGGCGTAC ACCGACCGGC TCGACCGGCA CGCCAGCGCG CACGCCGAGG GCGTCGCCCA GTGA
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Protein sequence | MTLLDRLLPI GGRRRPDLNG AVVVVTGGAR GIGAATARLF AQQGARVWIG DIDPDVAHTT AQTIPGARAG YLDVTDRASW DTLLTEVTAA AGPVDVLVNN AGVMPLGHFE SEAEATTDLI LDVNVRGMLN GMRATIPAMV HRGHGHVVNV ASMAGMIPLP GMVTYNASKF AALGASLGAR REYDGTGVAV CAILPAAVRT ELSSGAELGG ALPTVDPEDV AAAVVDTMRT RAARTSVPKW VAPGWSLVDA FVPEPVERLA RRLAGDRRGL DLDADARRAY TDRLDRHASA HAEGVAQ
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