Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2343 |
Symbol | |
ID | 4115609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2353176 |
End bp | 2353964 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638037123 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_645083 |
Protein GI | 108805146 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAAGTGA GGGAGATGCC TGCGCTCTCC GGCGGCGTGG TGGACCTCGA CCTCGAGGGC CGGAGGGCCT TCGTCACCGG GGCCGCGAGC GGCATCGGGC GGGCCTGCGC CGAGCGCCTC GCCCGGGCCG GCGCCTCGGT CGTGGTGGTC GACCTCGACG GTGAGGCCGC GCGGGCGGTC GCCGGGAGCA TCGGGGGGGA GGCCGTGCAG GCCGACCTCT CCGACTACGC CGCCCTCGAC GCGCTGGAGG TGGAGGCCGA CGTGGTGGTC AACAACGCCG GGCTGCAGCA CGTGGCGCCC GTGGAGGAGT TCCCGCCCGA GAAGTTCTCC CTCATGCTCC GGGTCATGCT CGAGGCGCCC TTCAGGATCG TCCGCAAGGC GCTGCCCCGG ATGTACGAGC GAGGGTGGGG GAGGGTCATC AACATCTCCT CCATCCACGG GCTCATCGCC TCGCCCTACA AGGCGGCCTA TGTTGCCGCC AAGCACGGCC TCGAGGGGCT TTCCAAGGTG ATCGCGCTCG AGGGCGGCCC GAAGGGGGTG ACCAGCAACT GCATCTGCCC GGCCTACGTC CGGACGCCGC TGGTGGAGAA CCAGATCTCC GACCAGGCCC GGACCCACGG CATCCCCGAG AGCGAGGTCG TAGAGAAGAT CATGCTCACC GAGCCCGCCA TAAAGCGCCT CATCGAGCCC GGGGAGGTCG CCGAGCTCGT GGCCTACCTC TGCTCCCCCG CCGCCTCGTT CATAAACGGT GCCTCGCTTA CAATAGACGG CGGGGCTACC GCCCACTAA
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Protein sequence | MQVREMPALS GGVVDLDLEG RRAFVTGAAS GIGRACAERL ARAGASVVVV DLDGEAARAV AGSIGGEAVQ ADLSDYAALD ALEVEADVVV NNAGLQHVAP VEEFPPEKFS LMLRVMLEAP FRIVRKALPR MYERGWGRVI NISSIHGLIA SPYKAAYVAA KHGLEGLSKV IALEGGPKGV TSNCICPAYV RTPLVENQIS DQARTHGIPE SEVVEKIMLT EPAIKRLIEP GEVAELVAYL CSPAASFING ASLTIDGGAT AH
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