Gene Cphamn1_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0180 
Symbol 
ID6373834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp175963 
End bp176700 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content51% 
IMG OID642682698 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001958635 
Protein GI189499165 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00307059 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAG GCAAAACCGC CGTTATAACA GGTGCCGCCA GAGGAATCGG TCAGGCAATC 
GCAGTAAACC TTGCCTCAAA AGGGGCAAAC ATCGTCATTT GTGATCTTCA GACAGAATGG
CTTGAAGAAA CAGCTGAAGC GATAAAAAAA ACAGGCGGAA AAGTCACCTG CAAGGAGCTT
GACGTCACAA ACCACGATAC CGCTTCTGCC GTCTTTCAGG AGATCGCTTC AGAGACCGGC
TCAATAGATA TCCTGATCAA CAATGCAGGC ATCACCCGTG ACGGCTTGCT GATGCGGATG
AGTGAAGCTG ACTGGGATGC TGTACTTGCC GTGAACCTTA AAGGCACCTT CAACTGCACC
AAGGCTGTCA GCCGCACCAT GATGAAACAG CGAAGCGGAG CGATCGTCAA TATCGCATCG
ATTATCGGCA TCATGGGTAA CGCCGGTCAG GCAAATTACG GTGCCTCCAA AGCCGGTGTC
ATCGCTTTCA CCAAGTCGGT AGCCAAGGAA CTTGCATCGA GAAACATCAG GGTTAACGCT
GTAGCCCCCG GGTTTATCAC ATCAAAAATG ACCGACGCGC TTTCAGATGA TGTTCGCGAC
GCCATGCTTG AGGCCATTCC TCTGAAACAG TTCGGCACTC CTGAAAATGT TGCCGATGTG
GTTTCGTTCC TTGCCAGCGA TCAGGCAGCC TATATCACCG GTGAAGTCGT GAACATAAGC
GGGGGCATGG TTATGTGA
 
Protein sequence
MFKGKTAVIT GAARGIGQAI AVNLASKGAN IVICDLQTEW LEETAEAIKK TGGKVTCKEL 
DVTNHDTASA VFQEIASETG SIDILINNAG ITRDGLLMRM SEADWDAVLA VNLKGTFNCT
KAVSRTMMKQ RSGAIVNIAS IIGIMGNAGQ ANYGASKAGV IAFTKSVAKE LASRNIRVNA
VAPGFITSKM TDALSDDVRD AMLEAIPLKQ FGTPENVADV VSFLASDQAA YITGEVVNIS
GGMVM