More than 300 homologs were found in PanDaTox collection
for query gene Amir_0395 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_0395  short-chain dehydrogenase/reductase SDR  100 
 
 
256 aa  482  1e-135  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6299  short-chain dehydrogenase/reductase SDR  66.94 
 
 
251 aa  308  8e-83  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.125126  normal 
 
 
-
 
NC_013172  Bfae_00620  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like  68.16 
 
 
260 aa  300  2e-80  Brachybacterium faecium DSM 4810  Bacteria  normal  0.297652  n/a   
 
 
-
 
NC_013595  Sros_8214  short chain dehydrogenase  68.98 
 
 
248 aa  293  1e-78  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6298  short-chain dehydrogenase/reductase SDR  63.24 
 
 
271 aa  291  5e-78  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.1246  normal 
 
 
-
 
NC_013131  Caci_1459  short-chain dehydrogenase/reductase SDR  70.68 
 
 
255 aa  280  1e-74  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.843425  normal  0.851299 
 
 
-
 
NC_012669  Bcav_4071  short-chain dehydrogenase/reductase SDR  64.06 
 
 
256 aa  275  4e-73  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.254174 
 
 
-
 
NC_013757  Gobs_2446  short-chain dehydrogenase/reductase SDR  67.48 
 
 
246 aa  262  4e-69  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0818672  n/a   
 
 
-
 
NC_014158  Tpau_0761  short-chain dehydrogenase/reductase SDR  60 
 
 
253 aa  253  1.0000000000000001e-66  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.562893  n/a   
 
 
-
 
NC_009664  Krad_4194  short-chain dehydrogenase/reductase SDR  63.41 
 
 
252 aa  240  1e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.870685  normal  0.0785008 
 
 
-
 
NC_013525  Tter_0268  short-chain dehydrogenase/reductase SDR  41.63 
 
 
250 aa  167  2e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_0077  short-chain dehydrogenase/reductase SDR  44.58 
 
 
248 aa  159  3e-38  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  44 
 
 
258 aa  157  2e-37  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
NC_009667  Oant_2067  short-chain dehydrogenase/reductase SDR  40.08 
 
 
246 aa  155  4e-37  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0642  short-chain dehydrogenase/reductase SDR  37.4 
 
 
252 aa  155  6e-37  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.220005 
 
 
-
 
NC_008148  Rxyl_3011  short-chain dehydrogenase/reductase SDR  42.04 
 
 
251 aa  155  6e-37  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1486  short-chain dehydrogenase/reductase SDR  44.21 
 
 
241 aa  152  2.9999999999999998e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.727774  normal 
 
 
-
 
NC_009505  BOV_1080  short chain dehydrogenase/reductase family oxidoreductase  39.68 
 
 
246 aa  149  4e-35  Brucella ovis ATCC 25840  Bacteria  normal  0.38691  n/a   
 
 
-
 
NC_004310  BR1122  short chain dehydrogenase/reductase family oxidoreductase  39.27 
 
 
246 aa  147  2.0000000000000003e-34  Brucella suis 1330  Bacteria  normal  0.0726405  n/a   
 
 
-
 
NC_008699  Noca_4009  short-chain dehydrogenase/reductase SDR  42.13 
 
 
240 aa  147  2.0000000000000003e-34  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0643  short-chain dehydrogenase/reductase SDR  36.95 
 
 
271 aa  145  4.0000000000000006e-34  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.224446 
 
 
-
 
NC_013947  Snas_5056  short-chain dehydrogenase/reductase SDR  40.83 
 
 
249 aa  144  2e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5738  short-chain dehydrogenase/reductase SDR  33.98 
 
 
257 aa  141  9e-33  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.759988  normal  0.0474831 
 
 
-
 
NC_010338  Caul_1544  short-chain dehydrogenase/reductase SDR  40 
 
 
244 aa  140  1.9999999999999998e-32  Caulobacter sp. K31  Bacteria  normal  normal  0.846723 
 
 
-
 
NC_008697  Noca_4814  short-chain dehydrogenase/reductase SDR  44 
 
 
257 aa  140  1.9999999999999998e-32  Nocardioides sp. JS614  Bacteria  normal  0.19857  normal 
 
 
-
 
NC_010085  Nmar_0026  short-chain dehydrogenase/reductase SDR  35.48 
 
 
269 aa  139  4.999999999999999e-32  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_011757  Mchl_1137  short-chain dehydrogenase/reductase SDR  39.2 
 
 
255 aa  138  7e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.420878 
 
 
-
 
NC_011661  Dtur_1771  short-chain dehydrogenase/reductase SDR  33.33 
 
 
252 aa  137  1e-31  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3961  short-chain dehydrogenase/reductase SDR  37.19 
 
 
243 aa  137  1e-31  Polaromonas sp. JS666  Bacteria  normal  0.985096  normal 
 
 
-
 
NC_013730  Slin_0415  short-chain dehydrogenase/reductase SDR  35.1 
 
 
257 aa  137  2e-31  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.560297 
 
 
-
 
NC_004310  BR0243  short chain dehydrogenase/reductase family oxidoreductase  38.78 
 
 
244 aa  136  4e-31  Brucella suis 1330  Bacteria  normal  0.550186  n/a   
 
 
-
 
NC_010676  Bphyt_6913  short-chain dehydrogenase/reductase SDR  39.26 
 
 
247 aa  136  4e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  0.214979  normal  0.444362 
 
 
-
 
NC_009505  BOV_0236  short chain dehydrogenase/reductase family oxidoreductase  38.78 
 
 
244 aa  136  4e-31  Brucella ovis ATCC 25840  Bacteria  normal  0.117254  n/a   
 
 
-
 
NC_008043  TM1040_3393  short-chain dehydrogenase/reductase SDR  37.02 
 
 
252 aa  136  4e-31  Ruegeria sp. TM1040  Bacteria  normal  normal  0.407663 
 
 
-
 
NC_008752  Aave_3876  short-chain dehydrogenase/reductase SDR  38.63 
 
 
266 aa  136  4e-31  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_2429  short-chain dehydrogenase/reductase SDR  39.5 
 
 
246 aa  135  5e-31  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0865  short-chain dehydrogenase/reductase SDR  33.9 
 
 
244 aa  135  5e-31  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.372052 
 
 
-
 
NC_008752  Aave_1551  short-chain dehydrogenase/reductase SDR  40.71 
 
 
270 aa  135  9e-31  Acidovorax citrulli AAC00-1  Bacteria  normal  0.2513  normal  0.363007 
 
 
-
 
NC_010465  YPK_2510  short-chain dehydrogenase/reductase SDR  35.77 
 
 
246 aa  134  9.999999999999999e-31  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1699  oxidoreductase, short chain dehydrogenase/reductase family protein  35.77 
 
 
246 aa  134  9.999999999999999e-31  Yersinia pestis Angola  Bacteria  normal  normal  0.0105879 
 
 
-
 
NC_009667  Oant_0317  short-chain dehydrogenase/reductase SDR  37.14 
 
 
244 aa  134  9.999999999999999e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.742877  n/a   
 
 
-
 
NC_011365  Gdia_2326  short-chain dehydrogenase/reductase SDR  38.52 
 
 
246 aa  134  9.999999999999999e-31  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_2412  oxidoreductase, short chain dehydrogenase/reductase family protein  35.77 
 
 
246 aa  134  9.999999999999999e-31  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_4018  short-chain dehydrogenase/reductase SDR  35.08 
 
 
254 aa  134  9.999999999999999e-31  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2434  short-chain dehydrogenase/reductase SDR  37.55 
 
 
252 aa  134  1.9999999999999998e-30  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.000391653  normal  0.106705 
 
 
-
 
NC_007488  RSP_4004  Short-chain dehydrogenase/reductase SDR  42.26 
 
 
259 aa  134  1.9999999999999998e-30  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.132038  n/a   
 
 
-
 
NC_009427  Saro_3432  short-chain dehydrogenase/reductase SDR  42.57 
 
 
269 aa  133  1.9999999999999998e-30  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.115705  n/a   
 
 
-
 
NC_011772  BCG9842_B1783  glucose 1-dehydrogenase  34.02 
 
 
247 aa  134  1.9999999999999998e-30  Bacillus cereus G9842  Bacteria  normal  0.88349  normal 
 
 
-
 
NC_009439  Pmen_2680  short chain dehydrogenase  39.11 
 
 
253 aa  133  3e-30  Pseudomonas mendocina ymp  Bacteria  normal  0.313407  normal  0.819387 
 
 
-
 
NC_007958  RPD_3325  short-chain dehydrogenase/reductase SDR  39.75 
 
 
244 aa  133  3e-30  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0113  short-chain dehydrogenase/reductase SDR  40.73 
 
 
262 aa  133  3e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.351696  n/a   
 
 
-
 
NC_010483  TRQ2_0608  short-chain dehydrogenase/reductase SDR  34.14 
 
 
251 aa  133  3e-30  Thermotoga sp. RQ2  Bacteria  normal  0.236394  n/a   
 
 
-
 
NC_008578  Acel_1849  short chain dehydrogenase  37.05 
 
 
255 aa  133  3e-30  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.838313 
 
 
-
 
NC_009486  Tpet_0594  short-chain dehydrogenase/reductase SDR  34.14 
 
 
251 aa  133  3e-30  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000426585  n/a   
 
 
-
 
NC_009485  BBta_2110  short chain dehydrogenase  40 
 
 
253 aa  133  3e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.94456 
 
 
-
 
NC_013093  Amir_2079  short chain dehydrogenase  37.89 
 
 
255 aa  132  3.9999999999999996e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1988  short-chain dehydrogenase/reductase SDR  32.82 
 
 
260 aa  132  3.9999999999999996e-30  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.730129 
 
 
-
 
NC_011365  Gdia_0880  short-chain dehydrogenase/reductase SDR  38.37 
 
 
250 aa  132  3.9999999999999996e-30  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3546  short-chain dehydrogenase/reductase SDR  34.98 
 
 
261 aa  132  3.9999999999999996e-30  Chelativorans sp. BNC1  Bacteria  normal  0.498935  n/a   
 
 
-
 
NC_011725  BCB4264_A3466  glucose 1-dehydrogenase  33.61 
 
 
247 aa  132  3.9999999999999996e-30  Bacillus cereus B4264  Bacteria  normal  0.0764776  n/a   
 
 
-
 
NC_013922  Nmag_2910  short-chain dehydrogenase/reductase SDR  39.42 
 
 
251 aa  132  5e-30  Natrialba magadii ATCC 43099  Archaea  normal  0.640216  n/a   
 
 
-
 
NC_007952  Bxe_B2957  putative short-chain dehydrogenase/reductase  38.84 
 
 
247 aa  132  5e-30  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1138  short-chain dehydrogenase/reductase SDR  39.29 
 
 
255 aa  132  6e-30  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2043  short chain dehydrogenase  35.86 
 
 
257 aa  132  6.999999999999999e-30  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_2060  short chain dehydrogenase  35.86 
 
 
257 aa  132  6.999999999999999e-30  Mycobacterium sp. MCS  Bacteria  normal  0.256692  n/a   
 
 
-
 
NC_008705  Mkms_2106  short chain dehydrogenase  35.86 
 
 
257 aa  132  6.999999999999999e-30  Mycobacterium sp. KMS  Bacteria  normal  normal  0.077628 
 
 
-
 
NC_009484  Acry_0086  short-chain dehydrogenase/reductase SDR  38.27 
 
 
250 aa  132  6.999999999999999e-30  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2455  short-chain dehydrogenase/reductase SDR  40.24 
 
 
251 aa  131  9e-30  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000407954 
 
 
-
 
NC_013526  Tter_1966  short-chain dehydrogenase/reductase SDR  35.22 
 
 
254 aa  131  9e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_1953  short chain dehydrogenase/reductase family oxidoreductase  35.66 
 
 
269 aa  130  1.0000000000000001e-29  Pseudomonas putida KT2440  Bacteria  normal  0.660502  hitchhiker  0.0000443121 
 
 
-
 
NC_008686  Pden_1040  short chain dehydrogenase  39.5 
 
 
253 aa  131  1.0000000000000001e-29  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1089  short-chain dehydrogenase/reductase SDR  38.43 
 
 
250 aa  130  1.0000000000000001e-29  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0497593 
 
 
-
 
NC_009832  Spro_0638  short-chain dehydrogenase/reductase SDR  35.48 
 
 
246 aa  129  3e-29  Serratia proteamaculans 568  Bacteria  normal  0.368584  normal 
 
 
-
 
NC_007802  Jann_2106  short-chain dehydrogenase/reductase SDR  38.03 
 
 
244 aa  130  3e-29  Jannaschia sp. CCS1  Bacteria  normal  0.248002  normal  0.662433 
 
 
-
 
NC_010623  Bphy_4295  short-chain dehydrogenase/reductase SDR  38.55 
 
 
247 aa  129  4.0000000000000003e-29  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_1601  short-chain dehydrogenase/reductase SDR  37.96 
 
 
258 aa  129  4.0000000000000003e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2494  short-chain dehydrogenase/reductase SDR  39.85 
 
 
291 aa  129  5.0000000000000004e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.60014  normal  0.0881916 
 
 
-
 
NC_008148  Rxyl_3193  short chain dehydrogenase  37.4 
 
 
255 aa  129  5.0000000000000004e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2637  short chain dehydrogenase  37.1 
 
 
249 aa  128  7.000000000000001e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  0.880192  normal  0.691513 
 
 
-
 
NC_009427  Saro_3657  short-chain dehydrogenase/reductase SDR  38.62 
 
 
290 aa  128  9.000000000000001e-29  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3128  short-chain dehydrogenase/reductase SDR  35.2 
 
 
253 aa  127  1.0000000000000001e-28  Rhodoferax ferrireducens T118  Bacteria  normal  0.199274  n/a   
 
 
-
 
NC_009565  TBFG_12873  short chain dehydrogenase  37.3 
 
 
258 aa  127  1.0000000000000001e-28  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1897  short-chain dehydrogenase/reductase SDR  38.06 
 
 
247 aa  127  1.0000000000000001e-28  Meiothermus ruber DSM 1279  Bacteria  normal  hitchhiker  0.00100219 
 
 
-
 
NC_009656  PSPA7_3623  short chain dehydrogenase  39.52 
 
 
253 aa  127  2.0000000000000002e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0211534  n/a   
 
 
-
 
NC_010483  TRQ2_1110  3-oxoacyl-(acyl-carrier-protein) reductase  33.47 
 
 
246 aa  127  2.0000000000000002e-28  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2736  short-chain dehydrogenase/reductase SDR  38.4 
 
 
255 aa  127  2.0000000000000002e-28  Dickeya zeae Ech1591  Bacteria  normal  0.777047  n/a   
 
 
-
 
NC_007348  Reut_B5464  NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR  38.11 
 
 
253 aa  126  3e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.852927  n/a   
 
 
-
 
NC_012791  Vapar_4308  short-chain dehydrogenase/reductase SDR  35.63 
 
 
259 aa  126  3e-28  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_0891  short-chain dehydrogenase/reductase SDR  39.09 
 
 
260 aa  126  3e-28  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.375615 
 
 
-
 
NC_013440  Hoch_3498  short-chain dehydrogenase/reductase SDR  38.89 
 
 
250 aa  126  3e-28  Haliangium ochraceum DSM 14365  Bacteria  normal  0.27381  normal  0.321582 
 
 
-
 
NC_011004  Rpal_3963  short-chain dehydrogenase/reductase SDR  39.26 
 
 
244 aa  126  3e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.944357  n/a   
 
 
-
 
NC_008254  Meso_3782  short-chain dehydrogenase/reductase SDR  38.1 
 
 
258 aa  126  3e-28  Chelativorans sp. BNC1  Bacteria  normal  0.143319  n/a   
 
 
-
 
NC_012669  Bcav_2700  short-chain dehydrogenase/reductase SDR  41.04 
 
 
268 aa  126  3e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.657901 
 
 
-
 
NC_013440  Hoch_4406  short-chain dehydrogenase/reductase SDR  39.11 
 
 
253 aa  126  4.0000000000000003e-28  Haliangium ochraceum DSM 14365  Bacteria  normal  0.410481  normal 
 
 
-
 
NC_007778  RPB_2094  short-chain dehydrogenase/reductase SDR  39.08 
 
 
244 aa  126  4.0000000000000003e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  hitchhiker  0.00509935 
 
 
-
 
NC_009439  Pmen_1651  short-chain dehydrogenase/reductase SDR  38.68 
 
 
254 aa  126  4.0000000000000003e-28  Pseudomonas mendocina ymp  Bacteria  normal  0.44826  normal 
 
 
-
 
NC_008697  Noca_4826  short-chain dehydrogenase/reductase SDR  39.33 
 
 
244 aa  126  4.0000000000000003e-28  Nocardioides sp. JS614  Bacteria  normal  normal  0.806753 
 
 
-
 
NC_010557  BamMC406_5956  short-chain dehydrogenase/reductase SDR  37.86 
 
 
248 aa  126  4.0000000000000003e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0788  short-chain dehydrogenase/reductase SDR  36.36 
 
 
244 aa  125  5e-28  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4062  short chain dehydrogenase  34.94 
 
 
257 aa  125  6e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.171649  normal  0.787909 
 
 
-
 
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