More than 300 homologs were found in PanDaTox collection
for query gene Noca_4009 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_4009  short-chain dehydrogenase/reductase SDR  100 
 
 
240 aa  484  1e-136  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3324  short-chain dehydrogenase/reductase SDR  42.74 
 
 
248 aa  166  2.9999999999999998e-40  Sphingomonas wittichii RW1  Bacteria  normal  0.057049  hitchhiker  0.000702749 
 
 
-
 
NC_008146  Mmcs_3395  short-chain dehydrogenase/reductase SDR  38.96 
 
 
255 aa  158  8e-38  Mycobacterium sp. MCS  Bacteria  normal  0.746696  n/a   
 
 
-
 
NC_008705  Mkms_3457  short-chain dehydrogenase/reductase SDR  38.96 
 
 
246 aa  158  9e-38  Mycobacterium sp. KMS  Bacteria  normal  0.678887  normal  0.189586 
 
 
-
 
NC_009077  Mjls_3405  short-chain dehydrogenase/reductase SDR  38.96 
 
 
246 aa  158  9e-38  Mycobacterium sp. JLS  Bacteria  normal  normal  0.772329 
 
 
-
 
NC_008726  Mvan_3777  short-chain dehydrogenase/reductase SDR  39.36 
 
 
246 aa  157  1e-37  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.603966 
 
 
-
 
NC_009338  Mflv_2757  short-chain dehydrogenase/reductase SDR  38.55 
 
 
246 aa  154  1e-36  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.8573 
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  40.56 
 
 
258 aa  154  1e-36  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
NC_009485  BBta_6893  putative 3-oxoacyl-(acyl-carrier-protein) reductase  38.06 
 
 
266 aa  149  3e-35  Bradyrhizobium sp. BTAi1  Bacteria  hitchhiker  0.00227102  normal  0.0503904 
 
 
-
 
NC_011992  Dtpsy_1869  short-chain dehydrogenase/reductase SDR  42.56 
 
 
263 aa  149  5e-35  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2790  short-chain dehydrogenase/reductase SDR  44.03 
 
 
269 aa  149  5e-35  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2046  short-chain dehydrogenase/reductase SDR  42.56 
 
 
263 aa  148  6e-35  Acidovorax sp. JS42  Bacteria  decreased coverage  0.00404736  normal 
 
 
-
 
NC_009427  Saro_3772  short-chain dehydrogenase/reductase SDR  39.17 
 
 
246 aa  148  7e-35  Novosphingobium aromaticivorans DSM 12444  Bacteria  hitchhiker  0.00117266  n/a   
 
 
-
 
NC_009486  Tpet_1020  3-oxoacyl-(acyl-carrier-protein) reductase  37.65 
 
 
246 aa  146  2.0000000000000003e-34  Thermotoga petrophila RKU-1  Bacteria  normal  0.0122832  n/a   
 
 
-
 
NC_010483  TRQ2_1110  3-oxoacyl-(acyl-carrier-protein) reductase  37.65 
 
 
246 aa  146  3e-34  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1300  short-chain dehydrogenase/reductase SDR  40.71 
 
 
262 aa  145  4.0000000000000006e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1241  short-chain dehydrogenase/reductase SDR  42.08 
 
 
260 aa  145  4.0000000000000006e-34  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0407787  normal  0.415093 
 
 
-
 
NC_011757  Mchl_1526  short-chain dehydrogenase/reductase SDR  39.45 
 
 
254 aa  144  9e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009487  SaurJH9_2499  short chain dehydrogenase  34.52 
 
 
272 aa  144  9e-34  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.496805  n/a   
 
 
-
 
NC_009632  SaurJH1_2549  short chain dehydrogenase  34.52 
 
 
272 aa  144  9e-34  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1803  short-chain dehydrogenase/reductase SDR  40.71 
 
 
262 aa  144  1e-33  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.225984 
 
 
-
 
NC_010505  Mrad2831_3742  short-chain dehydrogenase/reductase SDR  40.4 
 
 
260 aa  144  1e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.071685 
 
 
-
 
NC_010172  Mext_1326  short-chain dehydrogenase/reductase SDR  39.45 
 
 
254 aa  144  1e-33  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.393683 
 
 
-
 
NC_009832  Spro_4707  short-chain dehydrogenase/reductase SDR  36.73 
 
 
257 aa  143  2e-33  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4814  short-chain dehydrogenase/reductase SDR  39.52 
 
 
257 aa  143  2e-33  Nocardioides sp. JS614  Bacteria  normal  0.19857  normal 
 
 
-
 
NC_007963  Csal_2456  short-chain dehydrogenase/reductase SDR  39.38 
 
 
255 aa  142  3e-33  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.588805  n/a   
 
 
-
 
NC_012029  Hlac_1094  short-chain dehydrogenase/reductase SDR  39 
 
 
257 aa  142  3e-33  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_009767  Rcas_0104  short-chain dehydrogenase/reductase SDR  37.4 
 
 
246 aa  142  4e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.650868  normal 
 
 
-
 
NC_011661  Dtur_1771  short-chain dehydrogenase/reductase SDR  36.33 
 
 
252 aa  142  4e-33  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_3945  short-chain dehydrogenase/reductase SDR  40.08 
 
 
260 aa  142  5e-33  Ralstonia pickettii 12D  Bacteria  normal  normal  0.136099 
 
 
-
 
NC_010678  Rpic_3832  short-chain dehydrogenase/reductase SDR  40.08 
 
 
260 aa  142  5e-33  Ralstonia pickettii 12J  Bacteria  normal  0.919217  normal  0.496442 
 
 
-
 
NC_009427  Saro_3738  short-chain dehydrogenase/reductase SDR  36.61 
 
 
253 aa  142  6e-33  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1178  short-chain dehydrogenase/reductase SDR  41.3 
 
 
262 aa  141  8e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4552  short-chain dehydrogenase/reductase SDR  37.8 
 
 
246 aa  141  9e-33  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0313  3-oxoacyl-(acyl-carrier-protein) reductase  36.4 
 
 
239 aa  140  9.999999999999999e-33  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.00087118  n/a   
 
 
-
 
NC_012034  Athe_0213  short-chain dehydrogenase/reductase SDR  35.08 
 
 
264 aa  140  9.999999999999999e-33  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP2045  short chain dehydrogenase  33.33 
 
 
272 aa  140  1.9999999999999998e-32  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1056  oxidoreductase, short chain dehydrogenase/reductase family  38.65 
 
 
254 aa  140  1.9999999999999998e-32  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0904  Short-chain dehydrogenase/reductase SDR  37.6 
 
 
254 aa  140  1.9999999999999998e-32  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0643  short-chain dehydrogenase/reductase SDR  37.75 
 
 
271 aa  140  1.9999999999999998e-32  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.224446 
 
 
-
 
NC_008463  PA14_72840  putative short-chain dehydrogenase  36.99 
 
 
252 aa  140  1.9999999999999998e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.118155  normal 
 
 
-
 
NC_009656  PSPA7_6322  putative short-chain dehydrogenase  36.99 
 
 
252 aa  140  1.9999999999999998e-32  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_00620  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like  40.43 
 
 
260 aa  140  1.9999999999999998e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  0.297652  n/a   
 
 
-
 
NC_011737  PCC7424_5536  short-chain dehydrogenase/reductase SDR  34.14 
 
 
254 aa  139  3e-32  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0819159 
 
 
-
 
NC_008786  Veis_3774  short chain dehydrogenase  39.36 
 
 
258 aa  139  3e-32  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.644601  normal  0.413475 
 
 
-
 
NC_009338  Mflv_2501  short-chain dehydrogenase/reductase SDR  38.36 
 
 
233 aa  139  3.9999999999999997e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3536  short-chain dehydrogenase/reductase SDR  40.48 
 
 
274 aa  139  3.9999999999999997e-32  Polaromonas sp. JS666  Bacteria  normal  normal  0.446578 
 
 
-
 
NC_008146  Mmcs_2060  short chain dehydrogenase  38.37 
 
 
257 aa  139  3.9999999999999997e-32  Mycobacterium sp. MCS  Bacteria  normal  0.256692  n/a   
 
 
-
 
NC_008705  Mkms_2106  short chain dehydrogenase  38.37 
 
 
257 aa  139  3.9999999999999997e-32  Mycobacterium sp. KMS  Bacteria  normal  normal  0.077628 
 
 
-
 
NC_009077  Mjls_2043  short chain dehydrogenase  38.37 
 
 
257 aa  139  3.9999999999999997e-32  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0690  short-chain dehydrogenase/reductase SDR  41.06 
 
 
265 aa  139  4.999999999999999e-32  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.473951 
 
 
-
 
NC_009952  Dshi_0620  3-oxoacyl-[acyl-carrier-protein] reductase  38.27 
 
 
250 aa  138  6e-32  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.890979 
 
 
-
 
NC_008688  Pden_5052  short-chain dehydrogenase/reductase SDR  40 
 
 
246 aa  138  7e-32  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4257  Short-chain dehydrogenase/reductase SDR  41.04 
 
 
262 aa  138  8.999999999999999e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0797349  normal 
 
 
-
 
NC_007958  RPD_4158  short-chain dehydrogenase/reductase SDR  38.65 
 
 
262 aa  137  1e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.526951  normal 
 
 
-
 
NC_009379  Pnuc_0214  short-chain dehydrogenase/reductase SDR  38.52 
 
 
245 aa  137  1e-31  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4157  short-chain dehydrogenase/reductase SDR  38.79 
 
 
233 aa  137  1e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.981974  normal 
 
 
-
 
NC_009720  Xaut_2759  short-chain dehydrogenase/reductase SDR  38.37 
 
 
261 aa  136  3.0000000000000003e-31  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3677  short-chain dehydrogenase/reductase SDR  39.15 
 
 
233 aa  136  3.0000000000000003e-31  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3690  short-chain dehydrogenase/reductase SDR  39.15 
 
 
233 aa  136  3.0000000000000003e-31  Mycobacterium sp. JLS  Bacteria  normal  0.929403  normal 
 
 
-
 
NC_011726  PCC8801_0052  short-chain dehydrogenase/reductase SDR  38.91 
 
 
245 aa  136  3.0000000000000003e-31  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0050  short-chain dehydrogenase/reductase SDR  38.91 
 
 
245 aa  136  3.0000000000000003e-31  Cyanothece sp. PCC 8802  Bacteria  normal  0.795595  normal 
 
 
-
 
NC_007511  Bcep18194_B0533  short chain dehydrogenase  36.69 
 
 
257 aa  135  4e-31  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2860  3-hydroxybutyrate dehydrogenase  36.82 
 
 
258 aa  135  7.000000000000001e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0187623  normal  0.981149 
 
 
-
 
NC_012856  Rpic12D_2582  short chain dehydrogenase  39.29 
 
 
269 aa  135  8e-31  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2992  short chain dehydrogenase  39.68 
 
 
269 aa  134  9e-31  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0346  short-chain dehydrogenase/reductase SDR  38.28 
 
 
256 aa  134  9e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0244456  n/a   
 
 
-
 
NC_008705  Mkms_3750  short-chain dehydrogenase/reductase SDR  38.72 
 
 
233 aa  134  9e-31  Mycobacterium sp. KMS  Bacteria  normal  0.8736  normal  0.785854 
 
 
-
 
NC_009720  Xaut_1138  short-chain dehydrogenase/reductase SDR  38.55 
 
 
255 aa  134  9e-31  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0517  3-oxoacyl-(acyl-carrier-protein) reductase  34.66 
 
 
247 aa  134  9.999999999999999e-31  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6298  short-chain dehydrogenase/reductase SDR  38.2 
 
 
271 aa  134  9.999999999999999e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.1246  normal 
 
 
-
 
NC_012850  Rleg_3132  3-hydroxybutyrate dehydrogenase  36.05 
 
 
258 aa  134  9.999999999999999e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0908587  normal 
 
 
-
 
NC_010483  TRQ2_0608  short-chain dehydrogenase/reductase SDR  36.29 
 
 
251 aa  134  9.999999999999999e-31  Thermotoga sp. RQ2  Bacteria  normal  0.236394  n/a   
 
 
-
 
NC_009486  Tpet_0594  short-chain dehydrogenase/reductase SDR  36.29 
 
 
251 aa  134  9.999999999999999e-31  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000426585  n/a   
 
 
-
 
NC_011831  Cagg_1619  short-chain dehydrogenase/reductase SDR  38.98 
 
 
253 aa  134  9.999999999999999e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.901509  normal  0.0346671 
 
 
-
 
NC_009656  PSPA7_3623  short chain dehydrogenase  38.15 
 
 
253 aa  134  9.999999999999999e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0211534  n/a   
 
 
-
 
NC_010085  Nmar_0026  short-chain dehydrogenase/reductase SDR  36.55 
 
 
269 aa  134  1.9999999999999998e-30  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_010465  YPK_3420  short chain dehydrogenase  37.14 
 
 
256 aa  134  1.9999999999999998e-30  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0769277  n/a   
 
 
-
 
NC_009708  YpsIP31758_3287  short chain dehydrogenase  37.14 
 
 
256 aa  134  1.9999999999999998e-30  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1988  short-chain dehydrogenase/reductase SDR  35.08 
 
 
260 aa  134  1.9999999999999998e-30  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.730129 
 
 
-
 
NC_011004  Rpal_0113  short-chain dehydrogenase/reductase SDR  39.27 
 
 
262 aa  133  1.9999999999999998e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.351696  n/a   
 
 
-
 
NC_010159  YpAngola_A0950  short chain dehydrogenase  37.14 
 
 
256 aa  134  1.9999999999999998e-30  Yersinia pestis Angola  Bacteria  normal  0.477872  normal 
 
 
-
 
NC_008740  Maqu_1429  short-chain dehydrogenase/reductase SDR  37.6 
 
 
256 aa  134  1.9999999999999998e-30  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_4245  short-chain dehydrogenase/reductase SDR  40.74 
 
 
275 aa  133  3e-30  Sphingomonas wittichii RW1  Bacteria  normal  0.126058  normal 
 
 
-
 
NC_007488  RSP_4004  Short-chain dehydrogenase/reductase SDR  37.24 
 
 
259 aa  132  3e-30  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.132038  n/a   
 
 
-
 
NC_013131  Caci_6299  short-chain dehydrogenase/reductase SDR  38.68 
 
 
251 aa  133  3e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.125126  normal 
 
 
-
 
CP001800  Ssol_2412  short-chain dehydrogenase/reductase SDR  36.59 
 
 
248 aa  132  3.9999999999999996e-30  Sulfolobus solfataricus 98/2  Archaea  normal  0.253805  n/a   
 
 
-
 
NC_007948  Bpro_3961  short-chain dehydrogenase/reductase SDR  34.98 
 
 
243 aa  132  3.9999999999999996e-30  Polaromonas sp. JS666  Bacteria  normal  0.985096  normal 
 
 
-
 
NC_008025  Dgeo_0952  short-chain dehydrogenase/reductase SDR  38.31 
 
 
258 aa  132  3.9999999999999996e-30  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0412678  normal  0.59225 
 
 
-
 
NC_008697  Noca_4826  short-chain dehydrogenase/reductase SDR  39.83 
 
 
244 aa  132  3.9999999999999996e-30  Nocardioides sp. JS614  Bacteria  normal  normal  0.806753 
 
 
-
 
NC_009338  Mflv_4062  short chain dehydrogenase  37.55 
 
 
257 aa  132  5e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.171649  normal  0.787909 
 
 
-
 
NC_011901  Tgr7_1954  short chain dehydrogenase/reductase family oxidoreductase  35.06 
 
 
250 aa  132  5e-30  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4317  short-chain dehydrogenase/reductase SDR  39.83 
 
 
234 aa  132  6e-30  Frankia sp. EAN1pec  Bacteria  normal  0.0991034  normal  0.658106 
 
 
-
 
NC_013947  Snas_2729  short-chain dehydrogenase/reductase SDR  36.8 
 
 
250 aa  132  6e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.189012  normal  0.165554 
 
 
-
 
NC_010531  Pnec_0235  short-chain dehydrogenase/reductase SDR  37.04 
 
 
244 aa  132  6.999999999999999e-30  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1910  short-chain dehydrogenase/reductase SDR  39.02 
 
 
257 aa  131  6.999999999999999e-30  Caulobacter sp. K31  Bacteria  normal  0.621391  normal 
 
 
-
 
NC_013946  Mrub_1897  short-chain dehydrogenase/reductase SDR  36.21 
 
 
247 aa  132  6.999999999999999e-30  Meiothermus ruber DSM 1279  Bacteria  normal  hitchhiker  0.00100219 
 
 
-
 
NC_011831  Cagg_0178  short-chain dehydrogenase/reductase SDR  38.49 
 
 
247 aa  132  6.999999999999999e-30  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000108862  hitchhiker  0.000102827 
 
 
-
 
NC_010581  Bind_1760  short-chain dehydrogenase/reductase SDR  40.56 
 
 
255 aa  131  9e-30  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.233538  normal 
 
 
-
 
NC_012029  Hlac_1022  short-chain dehydrogenase/reductase SDR  36.9 
 
 
257 aa  131  1.0000000000000001e-29  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.522598  normal 
 
 
-
 
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