| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1089 |
|---|
| Symbol | |
|---|
| ID | 4695286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1214370 |
|---|
| End bp | 1215122 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639848869 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_995883 |
|---|
| Protein GI | 121608076 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0497593 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTGC AAGGCAAAAG CATTTTGATC ACTGCGGCCG GTCAGGGCAT AGGCCGCGCC
AGTGCGCTGG CCTGCGTGCG CGAGGGTGCG CAGGTGATCG CCACCGATAT CGATGCGGCG
CTGCTGGAGC GACTGGCCGC CGAGGCCAGC GGCTTGACGA CGCAGTTGCT GGATGTGCGC
GACAGCGCTG CCGTGACGGC GCTGGCGGCC CGGCTGCCGG CCCTGGATGG CCTGTTCAAC
TGCGCCGGTT TCGTGCACAA CGGCAGCATC CTGGACTGCG ATGAGGCGGC CTGGGACTTC
AGCATGGATC TGAACGTCAA GGGCGCTTAC CGCATGACGC GCGCTTTTCT TGCGGGCATG
CTGGACAAGA TGGCGCGCAC GGGCAGCAGC GGCTCGATCC TGAACATGGC CTCGATGGCG
TCGTCGATGA AGGGTTTCCC GAGGCGCTTC GTCTATGGCA CCACCAAGGC GGCGGTCATT
GGCATGACCA AGGCCATCGC CGCCGACTTC GTGCGCCAGG GTTTGCGCTG CAACGCTTTG
TGCCCCGGCA CCGTCGATAC GCCTTCATTG CGCCAGCGCA TCGCCAGCGC CGCCGATCCG
GTGCAGGCGG AAAAAGATTT CATCGCGCGC CAGCCCATGG GGCGCTTGGC GACGGTCGAT
GACATCACGC CGCAGGTGGT GTATTTGCTC AGCGACGAAT CGCGCTACGT CACGGGCCAG
GCGGTTTCGG TCGATGGCGG CACGAGCATC TGA
|
|---|
| Protein sequence | MRLQGKSILI TAAGQGIGRA SALACVREGA QVIATDIDAA LLERLAAEAS GLTTQLLDVR
DSAAVTALAA RLPALDGLFN CAGFVHNGSI LDCDEAAWDF SMDLNVKGAY RMTRAFLAGM
LDKMARTGSS GSILNMASMA SSMKGFPRRF VYGTTKAAVI GMTKAIAADF VRQGLRCNAL
CPGTVDTPSL RQRIASAADP VQAEKDFIAR QPMGRLATVD DITPQVVYLL SDESRYVTGQ
AVSVDGGTSI
|
|---|
| |