| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4814 |
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| Symbol | |
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| ID | 4595411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008697 |
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| Strand | - |
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| Start bp | 139351 |
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| End bp | 140124 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639772601 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_919261 |
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| Protein GI | 119714119 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 0.19857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAA GGTTCGAAGG CAAGGTCGCG ATCGTCACTG GGGCAGGCTC CGGGATCGGA
CGGGCGACCG CCGAACTGCT CGCCACCGAA GGCGGCGCCA TAGGCGTACT TGACCTGCGC
ATCGAGGCCG CGGAGGAGAC TGTCGCGGCC ATCACCGCCG CTGGAGGCCG TGCAATTGCC
CTCGCCGCCA ACGTGGCCGA CACCGCTGAA GTCGAAGCGG CCGTCGCCAA GGTCGTGGCG
GAGTACGGCG GTTTGCACGT GCTCTATAAC AACGCCGGCT GCGACTCCAA GGGGTCGGTC
GCGGACGCCA GCGATGCCGA CTGGGAGCGC GCGATGGCGG TCAACGCCAA GGGCACTTTC
GTCTGCTCGC GCGCGGCAGT CCCCCACATG GCCGCCTCGG GAGGCGGTGC CATCGTCAAC
CAGGGATCGG TGGCCGCCCT CGTAGGCGTG CCCAACTTCG CCGCGTACTG CGCCGCCAAG
GGAGCTGTCG TTGCGCTCAC TCGGTCGATG GCCGTCGACT TGGCGCCAGT CAAGATCCGG
GTCAACGTGA TCTGCCCGGG GACCGTCTTT ACCCCGCTGA TGGAGCCGAT GCTTCGGGCA
CGAGGCGATG GTGATCTCGA GGCCGGTCTG GCCAAGACAC TCGTGAAGTA CCCCATCGGA
CGGCTGGGCA CTCCCGAGGA AATCGCTCGG GTTGCAGCGT TCCTCGCGTC CGACGATTCC
TCCTTCCTGA CCGGTTCCGT CATCGCCGCC GATGGCGGAA TGACAGCGCA GTAG
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| Protein sequence | MSTRFEGKVA IVTGAGSGIG RATAELLATE GGAIGVLDLR IEAAEETVAA ITAAGGRAIA
LAANVADTAE VEAAVAKVVA EYGGLHVLYN NAGCDSKGSV ADASDADWER AMAVNAKGTF
VCSRAAVPHM AASGGGAIVN QGSVAALVGV PNFAAYCAAK GAVVALTRSM AVDLAPVKIR
VNVICPGTVF TPLMEPMLRA RGDGDLEAGL AKTLVKYPIG RLGTPEEIAR VAAFLASDDS
SFLTGSVIAA DGGMTAQ
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