| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0643 |
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| Symbol | |
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| ID | 4069581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 791303 |
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| End bp | 792118 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637982649 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_589722 |
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| Protein GI | 94967674 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.224446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG ATCTCTCCGG CAAGGTCGCC GTTGTTACCG GTGGCGCGAT GGGTATCGGT
GAAGCCTGCG CCCGCAAGAT CGCATTGGCC GGTGCGTCAG TCGCCATTCT CGATCCTAAC
GAGGACGCAG GCACGAAGAC TGCAGCCGCG ATCCGCGCGC ACGGCGGTGA GTGCAAATTC
TTTCGATGCG ATGTCAGCAA GTCGAAGGAT GTCGAGCAAG CTGTCGGCGA CGTCATCACG
AAGCATTCGC AGATTGACAT CCTGGTCAGC AACGCCGGCA TTCAATACTA CGGCGACGTC
ATTACCACTC CTGAAGACGA TTGGGACCGC GTCATCGGAG TGAACCTCAA AGGGTGCTTT
CTCATCTCGA AGTTCTGCGT GCCGCACATG ATAAGCAATG GCGGTGCAAT CGTCGTGCTC
GGCTCGGTGC AGAGTTTCAC CGCGATCCAG AACTCCGCGG CTTACGTCAC CTCGAAACAC
GCGGTCCTCG GTCTGGCGCG GGCCATGGCC CTCGACTATG CGCATAAAGG CATTCGCGTG
AATTGCGTTT GCCCCGGTAC CATCGACACG CCGATGCTCC ACTGGGCGGC GAGTCTTTCA
CCCGACCCGG AATCCGTGAT TCGCACCTGC GATCGAATGC ACGCGCTCGG TCGCATCGGT
AAACCGGACG AGGTCGCCGA CGCTGTTCTT TATCTCGCCT CGCCAATGTC TTCGTTCATC
ACGGGCGCCG CACTGCTGGT GGACGGCGGT ATGCTTGTTC CCGCAGGCGG CATGGCCTTC
CAGGAAGGCG GCACAGGAGC ATCCACGAAG AAATGA
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| Protein sequence | MKIDLSGKVA VVTGGAMGIG EACARKIALA GASVAILDPN EDAGTKTAAA IRAHGGECKF
FRCDVSKSKD VEQAVGDVIT KHSQIDILVS NAGIQYYGDV ITTPEDDWDR VIGVNLKGCF
LISKFCVPHM ISNGGAIVVL GSVQSFTAIQ NSAAYVTSKH AVLGLARAMA LDYAHKGIRV
NCVCPGTIDT PMLHWAASLS PDPESVIRTC DRMHALGRIG KPDEVADAVL YLASPMSSFI
TGAALLVDGG MLVPAGGMAF QEGGTGASTK K
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