| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6299 |
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| Symbol | |
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| ID | 8337662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7246015 |
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| End bp | 7246770 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644959400 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003116994 |
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| Protein GI | 256395430 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.125126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGACT TCAAGGGATT GACCGCCATC GTCACCGGCG GCGCCTCGGG GATCGGCCTG
GCCACGGCGA AGCTGCTGCA CAGCCGCGGC GCCGACGTCG CGGTGTTCGA CCTCAAGCCT
GACGGGCTGC CCGAGGGCAT CGTCGGGATC GAGGTCGACG TCACCGACGA CAGCCGGGTG
GCGTGGGCCG TGGAGGCCGT GGTCGAGCGG TTCGGGCAGC TGGATGTCGT GGTGAACAAC
GCCGGCATCC CGGCGATCGG CGACATCACC GGGAACTCCG ACGCGGAGTG GCTCGGGGTG
CTGGACGTCA ACGTGGTCGG GATGGTGCGG GTCGCGCGGC ACGCGCTGCC GCACCTGCGG
CGCTCGCCGG CCGCGGCGAT CGTCAACACG TGCTCGATCG TCGCCTGGGC CGGGATGGCG
CAGCGCGTGC TGTACTCGGC GAGCAAGGGC GCGGTCTACG CGCTGACCCT GGCGATGGCT
GCGGACCACG TCCGCGAGGG CATCCGGGTC AACTGCGTCG CGCCCGGGAC GGCCGACACG
CCCTGGGTGG ACCGGCAGCT CAACGAGCTC CCTGATCCAG AGGCGGCGCG GGCGGCGATG
AACGCCTTCC AGCCCGCGGG GCGTCTGGTG ACCGCCGACG AGGTGGCCGG GGCGATCGCG
TATCTGGCGA GCCCGCTGTC CGGCGGCACC GCCGGCACGG TGCTGGCCGT GGACAACGGT
ATGCACGGTC TGCGGCTGCG GCCGCCGGCG AAGTAG
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| Protein sequence | MNDFKGLTAI VTGGASGIGL ATAKLLHSRG ADVAVFDLKP DGLPEGIVGI EVDVTDDSRV
AWAVEAVVER FGQLDVVVNN AGIPAIGDIT GNSDAEWLGV LDVNVVGMVR VARHALPHLR
RSPAAAIVNT CSIVAWAGMA QRVLYSASKG AVYALTLAMA ADHVREGIRV NCVAPGTADT
PWVDRQLNEL PDPEAARAAM NAFQPAGRLV TADEVAGAIA YLASPLSGGT AGTVLAVDNG
MHGLRLRPPA K
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