| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2094 |
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| Symbol | |
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| ID | 3908508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 2379551 |
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| End bp | 2380285 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637883987 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_485711 |
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| Protein GI | 86749215 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00509935 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGACC GACTGAAAGG CAAGCGCGCA TTCGTCACGG CAGCGGCGGC GGGGATCGGC
CGGGCGTCGG CGATCGCGTT CGTGCGCGAG GGCGCCGAGG TGTTCGCCAC CGACATCGAC
GAGGCCGGGC TCGCCTCGCT CGCCAAGGAA GGCATCGGCG AAGCGGCGAA ACTCGACGTA
CGCGACAGCG ACGCGGTGGC CGCGATCGCA AAGCAGGTCG GCGCCGTCGA CATCCTGCTC
AACGCCGCGG GCTTCGTGCA TCACGGCACC GTGCTCGACT GTTCGGACGC CGATTGGGAC
TTTTCGTTCG ACCTCAACGT CAAGTCGATG CACCGCACCA TCCGCGCGTT CCTGCCGGGG
ATGCTGGAGA AAGGCGGCGG TTCGATCGTC AACATCTCGT CCGCCGCCGG CGTCTTCAAG
GCGGCGCCGA ACCGCTACGT CTATGGCGCG ACCAAAGCCG CGGTCGCAGC ACTCACGCGC
GCGATCGCCG CCGACTTCAT CACCCGCGGC ATCCGCTGCA ACGCGATCTG CCCGGGCACG
ATCGAGACGC CGTCGATGCT CGGTCGCGCC GCCGCCGCGG GCCCTCAGGG CCGCGAGATG
TTCGTGGCGC GCCAGCCGAT GGGTCGGCTC GGCACCGCCG AGGAAATCGC AGCACTCGCG
GTGTATCTCG CCAGCGACGA AAGCGCCTTC ACCACCGGCG TCGCGCACAT CATCGACGGC
GGCTGGACGT TGTAA
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| Protein sequence | MSDRLKGKRA FVTAAAAGIG RASAIAFVRE GAEVFATDID EAGLASLAKE GIGEAAKLDV
RDSDAVAAIA KQVGAVDILL NAAGFVHHGT VLDCSDADWD FSFDLNVKSM HRTIRAFLPG
MLEKGGGSIV NISSAAGVFK AAPNRYVYGA TKAAVAALTR AIAADFITRG IRCNAICPGT
IETPSMLGRA AAAGPQGREM FVARQPMGRL GTAEEIAALA VYLASDESAF TTGVAHIIDG
GWTL
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