Gene Gdia_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0880 
Symbol 
ID6974277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp996275 
End bp997027 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content69% 
IMG OID643390409 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002275285 
Protein GI209543056 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTGG CGGGCAAACG GGCTCTGATC ACGGCGGCAG CCAACGGCAT CGGTCGCGCG 
ACCGTGGAGG CCTTCATTCG CGAGGGCGCG GGCGTGATCG CAACCGATAT CGATCCCGGC
GTGATGGAGG CATGGGGCGA TCTCGGTCCT GGGGGGCGCG CGTTGCGGCT CGATGTCATG
GACCCGGCGG CGATCGACGA CGTGGCGCGC CAGGTCGGTT CCGTCGACGT GCTGTTCAAT
TGTGCCGGCA CGGTCCAGAA CGGCGCGCTG CTCGACTGCA CGGACCGGGA ATGGCAGTTC
TCGTTCGACC TGAATGTGAC GGCGATGTTC CGGATGATCC GCGCCTTCCT GCCCGGCATG
ATCGCGGCCG GCGGCGGCGC GATCGTCAAC ATGGCCTCGG TCGCGTCGAG CCTGAAGGGC
GTGGCGGACC GCTGCGCCTA TGGTGCCTCG AAGGCGGCCG TGATCGGCCT GACGAAATCG
ATCGCGACGG ACTATGTGCG TCACAATGTC CGCTGTAACG CCGTCTGCCC CGGTACCGTC
GAAACCCCGT CGCTGCGCGC CCGGGCCGAG GCGCTGGCCC GTGCGCGCGG TACCGACCTG
GACGCGGCAC TGGGCGCCTT TCGCGCGCGC CAGCCCATGG GCCGCCTGGG CACCGCCGAT
GAAATCGCGG AGGCCGTGGT CTATCTGGCC TCCGACGCCG CCGCGTTCGT GACCGGCAGC
ACGCTGGTCA TCGATGGCGG GTTCATCAAC TGA
 
Protein sequence
MRLAGKRALI TAAANGIGRA TVEAFIREGA GVIATDIDPG VMEAWGDLGP GGRALRLDVM 
DPAAIDDVAR QVGSVDVLFN CAGTVQNGAL LDCTDREWQF SFDLNVTAMF RMIRAFLPGM
IAAGGGAIVN MASVASSLKG VADRCAYGAS KAAVIGLTKS IATDYVRHNV RCNAVCPGTV
ETPSLRARAE ALARARGTDL DAALGAFRAR QPMGRLGTAD EIAEAVVYLA SDAAAFVTGS
TLVIDGGFIN