Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_4062 |
Symbol | |
ID | 4975376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 4314389 |
End bp | 4315162 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640458288 |
Product | short chain dehydrogenase |
Protein accession | YP_001135320 |
Protein GI | 145224642 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.171649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.787909 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGA GTCAGCGCCT CAAGGACAAG GTCGCCGTGA TCACCGGTGG CGCAAGCGGA ATCGGCCTGG CCACGGCCAA GCGGATGCGA TCCGAGGGTG CCATCGTCGT CATCGGCGAT CTCGACGAGA AGACCGGCAA GTCGGTCGCC AACGACCTGA ACGTGACCTT CGTGCAGGTC GACGTCTCCG ATCAGGTCGC GGTCGACAAT CTGTTCGACA CCGCGTTCGA GGTCCACGGC GGAGTCGACA TCGCGTTCAA CAACGCCGGC ATCAGCCCAC CCGAGGACGA CCTGATCGAG AACACGGGCA TCGATGCGTG GGACCGGGTG CAGGACATCA ACCTCAAGTC GGTGTTCTTC TGCTGCAAGG CCGCCTTGCG CCACATGGTG CCCGCGCAGA AGGGGTCCAT CGTCAACACC GCGTCCTTCG TGGCGGTGAA CGGATCGGCG ACGTCGCAGA TCTCCTACAC CGCGTCCAAG GGCGGCGTGC TGGCGATGTC GCGGGAACTC GGAATCCAGT ACGCGCGCCA GGGAATCCGG GTCAACGCGC TGTGCCCGGG GCCGGTGAAC ACGCCGCTGC TGCAGGAGCT GTTCGCCAAG GATCCCGAAC GTGCCGCGCG GCGGCTGGTG CACGTGCCGA TGGGTCGGTT CGCCGAACCC GAGGAACTCG CCGCCGCAGT GGCGTTCCTG GCCAGTGACG ACGCGTCGTT CATCACCGGA TCGAGCTTCC TGGTCGACGG AGGCATCACC GGTCACTACG TCACGCCGCT GTAG
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Protein sequence | MDLSQRLKDK VAVITGGASG IGLATAKRMR SEGAIVVIGD LDEKTGKSVA NDLNVTFVQV DVSDQVAVDN LFDTAFEVHG GVDIAFNNAG ISPPEDDLIE NTGIDAWDRV QDINLKSVFF CCKAALRHMV PAQKGSIVNT ASFVAVNGSA TSQISYTASK GGVLAMSREL GIQYARQGIR VNALCPGPVN TPLLQELFAK DPERAARRLV HVPMGRFAEP EELAAAVAFL ASDDASFITG SSFLVDGGIT GHYVTPL
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