Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1544 |
Symbol | |
ID | 5898999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 1635757 |
End bp | 1636491 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641562032 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001683172 |
Protein GI | 167645509 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.846723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATGG GAAGACTTTC CGGCAAGACC GCCCTGGTCA CCGCCGCCGC CCAGGGCATT GGCAAGGCCA GCGCCGAGCT GTTCGCGCGC GAGGGCGCGC GGGTGATCGC CACCGACATC AACGCGGCGC TGCTGGCGGA GATGGCCGGT TGCGAAACAC GCCGTCTGGA CGTGCTGGAC CCCCAGGCCA TTCTCGACCT CGCCGCCGAG TTGGGTCCGA TCGACGTGCT GTTCAACTGC GCCGGCTTCG TGCATTCCGG CACCATCCTC GACTGCGACG AGGCGGCCTG GGCGTTCTCC AACGAGATCA ACGTCAACGC CATGTACCGG ATGATCCGGG CCTTCCTCCC CGCCATGCTC GGCGCGGGCG GCGGGTCGAT CGTCAACATG TCGTCCGTGG CGAGCTCGAT CAAGGGCGTG CCCGGCCGCT TCGCCTATGG CGCCACCAAG GCCGCGGTGA TCGGCCTGAC CAAGGCGGTG GCGGCCGACT TCGTCGGCCA GGGCGTGCGA TGCAACGCCA TCTGCCCCGG CACCGTCGAG ACGCCATCGC TGAACCAGCG CCTGGCCGAC ACCGGCGACT ACGAGGCCGC TCGCCAGGCC TTCACGGCCC GCCAGCCGAT GGGACGCCTG GGCAAGCCCG AGGAACTAGC CCAACTGGCC CTCTACCTGG CCAGCGACGA GTCGGCCTTC ACCACCGGCC AGATCCACAT CATCGACGGG GGCTGGATCA ATTGA
|
Protein sequence | MTMGRLSGKT ALVTAAAQGI GKASAELFAR EGARVIATDI NAALLAEMAG CETRRLDVLD PQAILDLAAE LGPIDVLFNC AGFVHSGTIL DCDEAAWAFS NEINVNAMYR MIRAFLPAML GAGGGSIVNM SSVASSIKGV PGRFAYGATK AAVIGLTKAV AADFVGQGVR CNAICPGTVE TPSLNQRLAD TGDYEAARQA FTARQPMGRL GKPEELAQLA LYLASDESAF TTGQIHIIDG GWIN
|
| |