| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_4071 |
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| Symbol | |
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| ID | 7861169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 4502120 |
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| End bp | 4502890 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 643868174 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002884074 |
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| Protein GI | 229822548 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.254174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGGC CGACGACGGC GTCCGGCGAG TTCGCCGGTC TCGTCGCTCT GGTGACGGGT
GGGGCGAGCG GCATCGGCGC CGCGGTCGCC GCGGCGCTCA CCGAGCGCGG GGCGCGCGTC
GCGACGCTGG ACCGCAGCGC GCACGACGCC CAGCCGGGCG GCGTCGCCGT CGTCGCGGAC
GTGACGGACG ACGACGGCGT CCGGCGCGCC GTCGCGGAGG CCGCGGGCGC GCTCGGCGCA
CTCGACGTGC TCGTCAACAA CGCCGGCATC GGGGCCGCCG GGACGGTGGC CGACAACGAC
GACGCCGAGT GGCTGCGCGT GCTCGACGTC AACCTGCTCG GGCTCGTCCG CGTCACCCGG
GCGGCGCTGC CGCACCTGCG GGCCAGCGAG CACGCGGCGA TCGTCAACAC GTGCTCGGTC
GCGGCGAGCG CCGGCCTGCC GAACCGCGCG CTGTACTCCG CGACGAAGGG CGCCGTGCAG
TCGCTCACGC TCGCGATGGC CGCTGACCAC GTGCGCGAAG GAATCCGCGT GACGTGCGTG
AACCCGGGCA CCGTGGACAC CCCGTGGGTC GGGCGCCTGC TCGACGCCGC CGACGACCCG
GCCGCCGAGC GCGTGGCCCT CGCGGCGCGC CAGCCGAGCG GCCGGCTCGT CACCCCGGCC
GAGGTCGCGC ACGCCGTCTG CTACCTGGCG TCCCCGCTCG CGAGCGCGAC CACCGGCACG
ACCCTCGCCG TCGACGGCGG CATGCAGGGT CTGCGGCTGC GGCCCGAGTG A
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| Protein sequence | MSGPTTASGE FAGLVALVTG GASGIGAAVA AALTERGARV ATLDRSAHDA QPGGVAVVAD
VTDDDGVRRA VAEAAGALGA LDVLVNNAGI GAAGTVADND DAEWLRVLDV NLLGLVRVTR
AALPHLRASE HAAIVNTCSV AASAGLPNRA LYSATKGAVQ SLTLAMAADH VREGIRVTCV
NPGTVDTPWV GRLLDAADDP AAERVALAAR QPSGRLVTPA EVAHAVCYLA SPLASATTGT
TLAVDGGMQG LRLRPE
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